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SCNpilot_cont_500_bf_scaffold_7006

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7006_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1503
DNA (1503bp) protein (501aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] rbh
Leucyl aminopeptidase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7L5_NITMU rbh
Peptidase M17 {ECO:0000313|EMBL:KIO49005.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_500_bf_scaffold_7006_2
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1651..2637)
DNA (987bp) protein (329aa)
zinc-containing alcohol dehydrogenase superfamily protein; K00344 NADPH2:quinone reductase [EC:1.6.5.5] rbh
Bifunctional protein: zinc-containing alcohol dehydrogenase quinone oxidoreductase (NADPH:quinone reductase) Similar to arginate lyase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DW44_9PROT rbh
Bifunctional protein: zinc-containing alcohol dehydrogenase quinone oxidoreductase (NADPH:quinone reductase) Similar to arginate lyase {ECO:0000313|EMBL:CCU63545.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_cont_500_bf_scaffold_7006_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2809..3981
DNA (1173bp) protein (391aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] rbh
Chorismate synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLJ7_9PROT rbh
SCNpilot_cont_500_bf_scaffold_7006_4
unknown

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4727..5026
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7006_5
unknown

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5048..5272
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7006_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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5765..6460
DNA (696bp) protein (232aa)
Phosphoribosyl transferase domain protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DUZ7_9PROT rbh
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:CCU63175.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_7006_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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6462..7871
DNA (1410bp) protein (470aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:CCU63177.1}; EC=2.1.1.77 {ECO:0000313|EMBL:CCU63177.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK63_9PROT rbh
erythromycin esterase rbh
SCNpilot_cont_500_bf_scaffold_7006_8
unknown

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comp(7964..8134)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7006_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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8182..8994
DNA (813bp) protein (271aa)
Kazal-type serine protease inhibitor domain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLD1_9PROT rbh
Kazal-type serine protease inhibitor domain {ECO:0000313|EMBL:CCU63473.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
proteinase inhibitor I1, Kazal rbh
SCNpilot_cont_500_bf_scaffold_7006_10
unknown

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9191..9472
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7006_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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9563..10021
DNA (459bp) protein (153aa)
Heat shock protein Hsp20 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9V1_NITMU
heat shock protein Hsp20; K13993 HSP20 family protein
Heat shock protein Hsp20 {ECO:0000313|EMBL:ABB74470.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_500_bf_scaffold_7006_12
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10109..10558
DNA (450bp) protein (150aa)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLC8_9PROT
Histidine kinase {ECO:0000313|EMBL:KIO48911.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
signal-transduction protein
SCNpilot_cont_500_bf_scaffold_7006_13
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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10759..11232
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVV6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU63465.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
YbhB and YbcL; K06910
SCNpilot_cont_500_bf_scaffold_7006_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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11874..13232
DNA (1359bp) protein (453aa)
phospholipase D/transphosphatidylase; K06131 cardiolipin synthase [EC:2.7.8.-] rbh
Cardiolipin synthetase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLC4_9PROT rbh
Cardiolipin synthase {ECO:0000313|EMBL:KIO48910.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_500_bf_scaffold_7006_15
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13313..14356)
DNA (1044bp) protein (348aa)
Probable transmembrane protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKH8_9PROT rbh
Membrane protein {ECO:0000313|EMBL:KIO49764.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
transmembrane protein rbh
SCNpilot_cont_500_bf_scaffold_7006_16
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14653..15006
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DS49_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62205.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
Displaying 16 items

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