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SCNpilot_cont_500_bf_scaffold_7249

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7249_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..2162)
DNA (2160bp) protein (720aa)
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:CCU61692.1}; EC=2.1.1.13 {ECO:0000313|EMBL:CCU61692.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
metH; B12-dependent methionine synthase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGY8_9PROT
SCNpilot_cont_500_bf_scaffold_7249_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2104..2724)
DNA (621bp) protein (207aa)
metH; B12-dependent methionine synthase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Methionine synthase (B12-dependent) n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YD17_NITMU
Methionine synthase {ECO:0000313|EMBL:KIO49567.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_500_bf_scaffold_7249_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2839..4797)
DNA (1959bp) protein (653aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFA4_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU61691.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
amine oxidase rbh
SCNpilot_cont_500_bf_scaffold_7249_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4867..5460)
DNA (594bp) protein (198aa)
TPR repeat n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQI4_9PROT rbh
TPR repeat {ECO:0000313|EMBL:CCU61690.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7249_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5474..6181)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGT3_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU61689.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_cont_500_bf_scaffold_7249_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6178..6561)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH99_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61688.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_cont_500_bf_scaffold_7249_7
unknown

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6592..6921
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7249_8
unknown

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7014..7433
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7249_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7361..8944)
DNA (1584bp) protein (528aa)
Arylsulfatase regulator (Fe-S oxidoreductase) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGY3_9PROT rbh
Arylsulfatase regulator (Fe-S oxidoreductase) {ECO:0000313|EMBL:CCU61687.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
His-Xaa-Ser system radical SAM maturase HxsB
SCNpilot_cont_500_bf_scaffold_7249_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8941..10098)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFA3_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU61686.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_cont_500_bf_scaffold_7249_11
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10111..10806)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH13_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61593.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_cont_500_bf_scaffold_7249_12
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11112..12197)
DNA (1086bp) protein (362aa)
Alpha/beta hydrolase fold n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFG0_9PROT rbh
Alpha/beta hydrolase fold {ECO:0000313|EMBL:CCU61891.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
alpha/beta hydrolase fold protein; K07019 rbh
SCNpilot_cont_500_bf_scaffold_7249_13
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12575..13147
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P809_AROAE
hypothetical protein; K09122 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI06552.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
Displaying 13 items

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