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SCNpilot_cont_500_bf_scaffold_2160

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2160_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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126..2036
DNA (1911bp) protein (637aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Phytochrome, two-component sensor histidine kinase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIY4_9PROT rbh
multi-sensor signal transduction histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_2160_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2058..2471
DNA (414bp) protein (138aa)
Response regulator receiver domain protein (CheY-like) n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9I0_NITMU
response regulator receiver domain-containing protein
Response regulator receiver domain protein (CheY-like) {ECO:0000313|EMBL:ABB74591.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_500_bf_scaffold_2160_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2502..4226
DNA (1725bp) protein (575aa)
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ABB74590.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABB74590.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9I1_NITMU rbh
multi-sensor signal transduction histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_2160_4
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4233..4841)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Acinetobacter baumannii RepID=UPI0002B9B880
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_cont_500_bf_scaffold_2160_5
unknown

Not on your lists

4859..5011
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2160_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5062..5685
DNA (624bp) protein (208aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7]
Phage SPO1 DNA polymerase-related protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9I2_NITMU
DNA polymerase {ECO:0000313|EMBL:KIO49221.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_500_bf_scaffold_2160_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6099..6965
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ21_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO49130.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2160_8
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7049..7450)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI000367E666
Stress-induced protein {ECO:0000313|EMBL:AKH37736.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2160_9
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7796..8743
DNA (948bp) protein (316aa)
Membrane protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZQU3_9RHOO
Membrane protein {ECO:0000313|EMBL:EPZ17006.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
OmpA/MotB domain-containing protein; K03286 OmpA-OmpF porin, OOP family
SCNpilot_cont_500_bf_scaffold_2160_10
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9083..9355)
DNA (273bp) protein (91aa)
Uncharacterized protein n=5 Tax=Xanthomonas RepID=Q3BRX6_XANC5
hypothetical protein
General stress protein {ECO:0000313|EMBL:KGK66535.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
SCNpilot_cont_500_bf_scaffold_2160_11
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10056..12479
DNA (2424bp) protein (808aa)
Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase {ECO:0000313|EMBL:CCU61309.1}; EC=3.6.3.3 {ECO:0000313|EMBL:CCU61309.1};; EC=3.6.3.4 {ECO:0000313|EMBL:CCU61309.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFW8_9PROT rbh
SCNpilot_cont_500_bf_scaffold_2160_12
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12515..12724
DNA (210bp) protein (70aa)
Copper ion binding protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPE8_9PROT
Copper ion binding protein {ECO:0000313|EMBL:CCU61310.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
heavy metal transport/detoxification protein
SCNpilot_cont_500_bf_scaffold_2160_13
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12699..13016
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF28_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61311.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2160_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13210..13992
DNA (783bp) protein (261aa)
Probable cytochrome c2 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG52_9PROT rbh
Cytochrome C553 {ECO:0000313|EMBL:KIO47859.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
cytochrome c rbh
SCNpilot_cont_500_bf_scaffold_2160_15
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13989..15320
DNA (1332bp) protein (444aa)
Putative diheme cytochrome c-553 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGH4_9PROT rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KIO47840.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
cytochrome c, class I rbh
SCNpilot_cont_500_bf_scaffold_2160_16
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15360..16775)
DNA (1416bp) protein (472aa)
Sulfate transporter family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJY1_9PROT
Sulfate transporter {ECO:0000313|EMBL:KIO48167.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
sulfate transporter
SCNpilot_cont_500_bf_scaffold_2160_17
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17244..19499)
DNA (2256bp) protein (752aa)
TonB-dependent receptor n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJK0_9PROT rbh
TonB-dependent receptor {ECO:0000313|EMBL:CCU62902.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_500_bf_scaffold_2160_18
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19520..19774
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DU47_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48172.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_500_bf_scaffold_2160_19
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19933..20439)
DNA (507bp) protein (169aa)
Cupin domain protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK32_9PROT
Cupin domain protein {ECO:0000313|EMBL:CCU62898.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
cupin
SCNpilot_cont_500_bf_scaffold_2160_20
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20913..21293)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJJ6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48173.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_500_bf_scaffold_2160_21
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21461..22180)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DU44_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62895.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2160_22
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22328..22768)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y941_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74730.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_500_bf_scaffold_2160_23
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22970..23929)
DNA (960bp) protein (320aa)
ABC-3 protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9N8_NITMU rbh
hypothetical protein; K02075 zinc/manganese transport system permease protein rbh
ABC-3 protein {ECO:0000313|EMBL:ABB74533.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_500_bf_scaffold_2160_24
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23929..24762)
DNA (834bp) protein (278aa)
ABC transporter related protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9N7_NITMU rbh
ABC transporter {ECO:0000313|EMBL:KIO47935.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
ABC transporter-like protein; K02074 zinc/manganese transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2160_25
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24734..25597)
DNA (864bp) protein (288aa)
Periplasmic solute binding protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9N6_NITMU rbh
periplasmic solute binding protein; K02077 zinc/manganese transport system substrate-binding protein rbh
Periplasmic solute binding protein {ECO:0000313|EMBL:ABB74535.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_500_bf_scaffold_2160_26
unknown

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comp(25705..25953)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2160_27
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26033..28219
DNA (2187bp) protein (729aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00036DF259 rbh
TonB-dependent receptor rbh
Putative TonB-dependent receptor {ECO:0000313|EMBL:AAU91589.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
SCNpilot_cont_500_bf_scaffold_2160_28
unknown

Not on your lists

comp(28466..28891)
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2160_29
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28973..29731
DNA (759bp) protein (253aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956, ECO:0000313|EMBL:KIO47939.1}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1] rbh
Carbonic anhydrase n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZGZ5_9PROT rbh
SCNpilot_cont_500_bf_scaffold_2160_30
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29838..30143)
DNA (306bp) protein (102aa)
Cell division protein FtsB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9N9_NITMU
Cell division protein FtsB {ECO:0000256|HAMAP-Rule:MF_00599, ECO:0000256|SAAS:SAAS00014481}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
septum formation initiator; K05589 cell division protein FtsB
Displaying items 1-30 of 32 in total

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