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SCNpilot_cont_500_bf_scaffold_2419

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2419_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..290)
DNA (288bp) protein (96aa)
Membrane protein involved in aromatic hydrocarbon degradation n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBR3_NITMU
aromatic hydrocarbon degradation protein; K06076 long-chain fatty acid transport protein
Membrane protein involved in aromatic hydrocarbon degradation {ECO:0000313|EMBL:ABB73808.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_500_bf_scaffold_2419_2
unknown

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comp(343..579)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2419_3
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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830..1423
DNA (594bp) protein (198aa)
Cytochrome P460 n=1 Tax=Nitrosomonas sp. AL212 RepID=F0TD31_9PROT
cytochrome P460
Cytochrome P460 {ECO:0000313|EMBL:ADZ27993.1}; Flags: Precursor;; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
SCNpilot_cont_500_bf_scaffold_2419_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1425..2042
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Moritella dasanensis RepID=UPI0002EE1344
Cytochrome C {ECO:0000313|EMBL:KIO48555.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
cytochrome c, class I
SCNpilot_cont_500_bf_scaffold_2419_5
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2233..2991
DNA (759bp) protein (253aa)
Transcriptional regulator, LysR family n=1 Tax=Nitrosomonas sp. AL212 RepID=F0TD32_9PROT
LysR family transcriptional regulator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADZ27994.1}; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
SCNpilot_cont_500_bf_scaffold_2419_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3369..3953)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPI2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61360.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2419_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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4210..5169
DNA (960bp) protein (320aa)
Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGK3_9PROT rbh
Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress {ECO:0000313|EMBL:CCU61358.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
glycine cleavage T protein (aminomethyl transferase); K06980 rbh
SCNpilot_cont_500_bf_scaffold_2419_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5750..8557
DNA (2808bp) protein (936aa)
Extracellular Matrix protein PelA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG80_9PROT rbh
Extracellular Matrix protein PelA {ECO:0000313|EMBL:CCU61357.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2419_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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8595..11288
DNA (2694bp) protein (898aa)
Extracellular Matrix protein PelB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF37_9PROT rbh
Pectate lyase {ECO:0000313|EMBL:KIO49228.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2419_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11285..12568
DNA (1284bp) protein (428aa)
Extracellular Matrix protein PelD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPH8_9PROT rbh
Extracellular Matrix protein PelD {ECO:0000313|EMBL:KIO49166.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2419_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12568..13653
DNA (1086bp) protein (362aa)
Extracellular Matrix protein PelE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFZ5_9PROT rbh
Extracellular Matrix protein PelE {ECO:0000313|EMBL:KIO49165.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2419_12
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13689..15338
DNA (1650bp) protein (550aa)
Extracellular matrix protein PelF,glycosyltransferase, group 1 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGJ9_9PROT rbh
Extracellular matrix protein PelF,glycosyltransferase, group 1 {ECO:0000313|EMBL:CCU61353.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
group 1 glycosyl transferase rbh
SCNpilot_cont_500_bf_scaffold_2419_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15338..16708
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y893_NITMU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB75028.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_500_bf_scaffold_2419_14
unknown

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comp(16813..17739)
DNA (927bp) protein (309aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2419_15
unknown

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comp(17799..18041)
DNA (243bp) protein (81aa)

This feature has no annotations

Displaying 15 items

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