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SCNpilot_cont_500_bf_scaffold_411

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_411_1
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66..1004
DNA (939bp) protein (313aa)
Resolvase domain protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z4V7_9NEIS
resolvase domain-containing protein
Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
SCNpilot_cont_500_bf_scaffold_411_2
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1115..2299
DNA (1185bp) protein (395aa)
Site-specific recombinase XerD n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VNC3_9BURK rbh
Site-specific recombinase XerD {ECO:0000313|EMBL:EJN07612.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
integrase family protein rbh
SCNpilot_cont_500_bf_scaffold_411_3
unknown

Not on your lists

2370..3029
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_411_4
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3972..4907
DNA (936bp) protein (312aa)
Virulence-associated protein E n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYL8_9BRAD
Virulence-associated protein E {ECO:0000313|EMBL:EAQ34923.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
virulence-associated protein E
SCNpilot_cont_500_bf_scaffold_411_5
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4900..6858
DNA (1959bp) protein (653aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3ST72_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA04519.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_411_6
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6855..7349
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYL6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJZ31182.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
SCNpilot_cont_500_bf_scaffold_411_7
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7413..7688
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GH17_NITSI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ02499.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
SCNpilot_cont_500_bf_scaffold_411_8
unknown

Not on your lists

7685..7882
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_411_9
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9420..10463
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00031913ED
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCNpilot_cont_500_bf_scaffold_411_10
unknown

Not on your lists

comp(10362..10598)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_411_11
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10715..10942)
DNA (228bp) protein (76aa)
Transcriptional regulator, XRE family n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZPM8_THASP
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACK54874.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
SCNpilot_cont_500_bf_scaffold_411_12
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11526..11858
DNA (333bp) protein (111aa)
Nuclease (SNase domain protein) n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WP42_VEREI
nuclease
Putative prophage MuMc02, nuclease {ECO:0000313|EMBL:CDH47059.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
SCNpilot_cont_500_bf_scaffold_411_13
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11931..12983
DNA (1053bp) protein (351aa)
Type VI secretion-associated protein, ImpA family n=1 Tax=Burkholderia terrae BS001 RepID=I5CZB2_9BURK
Putative Type VI secretion-associated protein,ImpA family {ECO:0000313|EMBL:CDI02686.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
type VI secretion-associated protein, ImpA family; K11902 type VI secretion system protein ImpA
SCNpilot_cont_500_bf_scaffold_411_14
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13192..13704
DNA (513bp) protein (171aa)
Uncharacterized protein ImpB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH45_9PROT rbh
Uncharacterized protein ImpB {ECO:0000313|EMBL:CCU62621.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
sciH; hypothetical protein; K11901 type VI secretion system protein ImpB
SCNpilot_cont_500_bf_scaffold_411_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13755..15248
DNA (1494bp) protein (498aa)
Uncharacterized protein ImpC n=1 Tax=Nitrosospira sp. APG3 RepID=M5DTA9_9PROT rbh
Uncharacterized protein ImpC {ECO:0000313|EMBL:CCU62620.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
sciI; hypothetical protein; K11900 type VI secretion system protein ImpC rbh
SCNpilot_cont_500_bf_scaffold_411_16
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15499..15981
DNA (483bp) protein (161aa)
Uncharacterized protein ImpD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIV4_9PROT rbh
Uncharacterized protein ImpD {ECO:0000313|EMBL:CCU62619.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein; K11903 type VI secretion system secreted protein Hcp
SCNpilot_cont_500_bf_scaffold_411_17
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16191..16676
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJE3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62618.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Hcp1 family type VI secretion system effector; K11903 type VI secretion system secreted protein Hcp
SCNpilot_cont_500_bf_scaffold_411_18
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16708..17541
DNA (834bp) protein (278aa)
Protein of avirulence locus ImpE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIZ2_9PROT rbh
Protein of avirulence locus ImpE {ECO:0000313|EMBL:CCU62617.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
sciE; hypothetical protein; K11898 type VI secretion system protein ImpE rbh
SCNpilot_cont_500_bf_scaffold_411_19
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17543..18055
DNA (513bp) protein (171aa)
Uncharacterized protein ImpF n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH41_9PROT
Uncharacterized protein ImpF {ECO:0000313|EMBL:CCU62616.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
type VI secretion system lysozyme-like protein; K11897 type VI secretion system protein ImpF
SCNpilot_cont_500_bf_scaffold_411_20
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18315..20189
DNA (1875bp) protein (625aa)
Protein ImpG/VasA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DTA0_9PROT rbh
Protein ImpG/VasA {ECO:0000313|EMBL:CCU62615.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
sciC; hypothetical protein; K11896 type VI secretion system protein ImpG rbh
SCNpilot_cont_500_bf_scaffold_411_21
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20165..21217
DNA (1053bp) protein (351aa)
Uncharacterized protein ImpH/VasB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIU8_9PROT rbh
Uncharacterized protein ImpH/VasB {ECO:0000313|EMBL:CCU62614.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
sciB; hypothetical protein; K11895 type VI secretion system protein ImpH rbh
SCNpilot_cont_500_bf_scaffold_411_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21329..24211
DNA (2883bp) protein (961aa)
Type VI secretion ATPase, ClpV1 family n=1 Tax=Variovorax sp. CF313 RepID=J3CNK3_9BURK rbh
Type VI secretion ATPase, ClpV1 family {ECO:0000313|EMBL:EJL75071.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
type VI secretion ATPase, clpv1 family; K11907 type VI secretion system protein VasG rbh
SCNpilot_cont_500_bf_scaffold_411_23
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24338..24766)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Xanthomonas sacchari RepID=UPI0002631D17
Uncharacterized protein {ECO:0000313|EMBL:AJC46109.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCNpilot_cont_500_bf_scaffold_411_24
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24981..25454
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI00036CE83D
GCN5-like N-acetyltransferase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
SCNpilot_cont_500_bf_scaffold_411_25
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25899..26495
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SYI6_META2
hypothetical protein; K07491 putative transposase
Tax=RBG_16_Betaproteobacteria_58_11_curated
SCNpilot_cont_500_bf_scaffold_411_26
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26702..28123
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQ22_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU61550.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_411_27
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28430..28594
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KCD6_AZOSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL96492.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
SCNpilot_cont_500_bf_scaffold_411_28
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28698..30959
DNA (2262bp) protein (754aa)
Rhs-family protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5DTB1_9GAMM rbh
Rhs-family protein {ECO:0000313|EMBL:ESS70646.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
Rhs-family protein rbh
SCNpilot_cont_500_bf_scaffold_411_29
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30984..31541
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6YPE0_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO96161.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_411_30
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31557..32672
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BS17_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ESS70644.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
hypothetical protein rbh
Displaying items 1-30 of 59 in total

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