name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_460_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..1304)
|
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
ATP-dependent DNA helicase pcrA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI70_9PROT
UvrD/REP helicase
|
|
SCNpilot_cont_500_bf_scaffold_460_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1301..1819)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJW7_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
SCNpilot_cont_500_bf_scaffold_460_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1882..3162)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJW7_9PROT
rbh
DNA repair protein {ECO:0000313|EMBL:KIO50171.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_460_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3104..3937)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJW7_9PROT
DNA repair protein {ECO:0000313|EMBL:KIO50171.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
putative DNA repair protein
|
|
SCNpilot_cont_500_bf_scaffold_460_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3959..4282)
|
4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB43_NITMU
Ferredoxin {ECO:0000313|EMBL:KIO50496.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
4Fe-4S ferredoxin; K05524 ferredoxin
|
|
SCNpilot_cont_500_bf_scaffold_460_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4778..6853)
|
Alpha-amylase {ECO:0000313|EMBL:CCU63069.1}; EC=3.2.1.1 {ECO:0000313|EMBL:CCU63069.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Alpha-amylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJU0_9PROT
rbh
hypothetical protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_460_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7257..8966)
|
Amylopullulanase {ECO:0000313|EMBL:CCU63071.1}; EC=3.2.1.1 {ECO:0000313|EMBL:CCU63071.1};; EC=3.2.1.41 {ECO:0000313|EMBL:CCU63071.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Amylopullulanase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI76_9PROT
rbh
glycoside hydrolase family protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_460_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9086..10456)
|
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
glgC; glucose-1-phosphate adenylyltransferase; K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
rbh
Glucose-1-phosphate adenylyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJX0_9PROT
rbh
|
|
SCNpilot_cont_500_bf_scaffold_460_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10527..12749
|
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685, ECO:0000256|SAAS:SAAS00046836};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Ni
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DUL8_9PROT
rbh
|
|
SCNpilot_cont_500_bf_scaffold_460_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13342..14736
|
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484, ECO:0000313|EMBL:KIO50174.1}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Glycogen synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKH9_9PROT
rbh
|
|
SCNpilot_cont_500_bf_scaffold_460_11
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14788..17343)
|
Glycogen phosphorylase {ECO:0000313|EMBL:CCU63079.1}; EC=2.4.1.1 {ECO:0000313|EMBL:CCU63079.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Glycogen phosphorylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJU9_9PROT
rbh
|
|
SCNpilot_cont_500_bf_scaffold_460_12
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17370..17915)
|
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045, ECO:0000313|EMBL:KIO50176.1}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
oligoribonuclease; K13288 oligoribonuclease [EC:3.1.-.-]
Oligoribonuclease n=1 Tax=Nitrosospira sp. APG3 RepID=M5DUM4_9PROT
|
|
SCNpilot_cont_500_bf_scaffold_460_13
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18067..19359
|
Ste24 endopeptidase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI89_9PROT
rbh
Peptidase M48 {ECO:0000313|EMBL:KIO50177.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_cont_500_bf_scaffold_460_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19393..19734
|
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000255|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000255|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Short=PCD {ECO:0000255|HAMAP-Rule:MF_00434};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospi
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=PHS_NITMU
|
|
SCNpilot_cont_500_bf_scaffold_460_15
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19731..20630
|
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKI4_9PROT
rbh
|
|
SCNpilot_cont_500_bf_scaffold_460_16
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21025..21609)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJV3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU63084.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
AIG2 family protein
|
|
SCNpilot_cont_500_bf_scaffold_460_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21863..22285)
|
UspA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI96_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO50180.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
UspA domain-containing protein
|
|
SCNpilot_cont_500_bf_scaffold_460_18
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22380..23729)
|
Sulfate transporter family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJY1_9PROT
rbh
Sulfate transporter {ECO:0000313|EMBL:KIO50181.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
sulfate transporter
rbh
|
|
SCNpilot_cont_500_bf_scaffold_460_19
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25031..25522)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJV7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO50182.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_460_20
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25988..26317)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DUC9_9PROT
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:KIO49125.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_460_21
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26435..27412)
|
Putative sodium-dependent bicarbonate transporter n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJN1_9PROT
rbh
Sodium-dependent bicarbonate transporter {ECO:0000313|EMBL:KIO49126.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein; K07086
rbh
|
|
SCNpilot_cont_500_bf_scaffold_460_22
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28307..29731
|
NADH-ubiquinone oxidoreductase chain M {ECO:0000313|EMBL:CCU63093.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CCU63093.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3]
rbh
NADH-ubiquinone oxidoreductase chain M n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKJ3_9PROT
rbh
|
|
SCNpilot_cont_500_bf_scaffold_460_23
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29734..33018
|
||
SCNpilot_cont_500_bf_scaffold_460_24
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33023..34654
|
NADH-ubiquinone oxidoreductase chain L n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJZ6_9PROT
rbh
NADH-ubiquinone oxidoreductase {ECO:0000313|EMBL:KIO50188.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
NADH/Ubiquinone/plastoquinone (complex I)
rbh
|
|
SCNpilot_cont_500_bf_scaffold_460_25
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34662..36224
|
NADH-ubiquinone oxidoreductase chain M {ECO:0000313|EMBL:CCU62847.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CCU62847.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3]
rbh
NADH-ubiquinone oxidoreductase chain M n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJG6_9PROT
rbh
|
|
SCNpilot_cont_500_bf_scaffold_460_26
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
36217..37713
|
proton-translocating NADH-quinone oxidoreductase, chain M; K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3]
rbh
NADH-ubiquinone oxidoreductase chain M n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHP7_9PROT
rbh
Oxidoreductase {ECO:0000313|EMBL:KIO50189.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_cont_500_bf_scaffold_460_27
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(37846..38964)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJD4_9PROT
rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU62844.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_460_28
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(39221..40489)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:KIO50191.1}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Two-component system sensor protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJZ2_9PROT
rbh
periplasmic sensor signal transduction histidine kinase
rbh
|
|
SCNpilot_cont_500_bf_scaffold_460_29
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(40476..41159)
|
DNA-binding response regulator n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJG3_9PROT
rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:KIO50192.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
two component transcriptional regulator
rbh
|
|
SCNpilot_cont_500_bf_scaffold_460_30
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(41301..42368)
|
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37]
rbh
Uroporphyrinogen decarboxylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DTZ9_9PROT
rbh
|