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SCNpilot_cont_500_bf_scaffold_577

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_577_1
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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1..264
DNA (264bp) protein (88aa)
Prevent-host-death family protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QE23_9CYAN
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:AGY57212.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
SCNpilot_cont_500_bf_scaffold_577_2
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

261..674
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QEB1_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY57213.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
SCNpilot_cont_500_bf_scaffold_577_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1021..3120)
DNA (2100bp) protein (700aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
glycogen debranching protein GlgX; K02438 glycogen operon protein GlgX [EC:3.2.1.-] rbh
Glycogen debranching enzyme n=1 Tax=Nitrosospira sp. APG3 RepID=M5DRN1_9PROT rbh
SCNpilot_cont_500_bf_scaffold_577_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3558..5075
DNA (1518bp) protein (506aa)
FAD dependent oxidoreductase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8W9_NITMU rbh
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABB74802.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_500_bf_scaffold_577_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5035..5787)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8W8_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74803.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_500_bf_scaffold_577_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6050..7180
DNA (1131bp) protein (377aa)
Diguanylate cyclase (GGDEF domain) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DRN9_9PROT rbh
Diguanylate cyclase (GGDEF domain) {ECO:0000313|EMBL:CCU62090.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
diguanylate cyclase rbh
SCNpilot_cont_500_bf_scaffold_577_7
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7354..7623)
DNA (270bp) protein (90aa)
Uncharacterized conserved small protein-like protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV09_POLNA
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_500_bf_scaffold_577_8
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7620..8927)
DNA (1308bp) protein (436aa)
Conjugation TrbI family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV08_POLNA rbh
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_cont_500_bf_scaffold_577_9
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8930..9943)
DNA (1014bp) protein (338aa)
Conjugal transfer protein TrbG/VirB9/CagX n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV07_POLNA rbh
conjugal transfer protein TrbG/VirB9/CagX; K03204 type IV secretion system protein VirB9 rbh
Conjugal transfer protein TrbG/VirB9/CagX {ECO:0000313|EMBL:ABM39485.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_500_bf_scaffold_577_10
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9940..10644)
DNA (705bp) protein (235aa)
Conjugal transfer protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV06_POLNA rbh
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 rbh
Conjugal transfer protein {ECO:0000313|EMBL:ABM39484.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_500_bf_scaffold_577_11
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10657..12042)
DNA (1386bp) protein (462aa)
TrbL/VirB6 plasmid conjugal transfer protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV05_POLNA rbh
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL rbh
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:ABM39483.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_500_bf_scaffold_577_12
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12052..12780)
DNA (729bp) protein (243aa)
Putative conjugal transfer TrbJ signal peptide protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV04_POLNA rbh
conjugal transfer protein TrbJ rbh
Putative conjugal transfer TrbJ signal peptide protein {ECO:0000313|EMBL:ABM39482.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_500_bf_scaffold_577_13
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12777..15215)
DNA (2439bp) protein (813aa)
AAA ATPase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV03_POLNA rbh
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4 rbh
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_cont_500_bf_scaffold_577_14
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15237..15497)
DNA (261bp) protein (87aa)
Putative conjugal transfer TrbD transmembrane protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV02_POLNA
putative conjugal transfer TrbD transmembrane protein; K03198 type IV secretion system protein VirB3
Putative conjugal transfer TrbD transmembrane protein {ECO:0000313|EMBL:ABM39480.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_500_bf_scaffold_577_15
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15494..15862)
DNA (369bp) protein (123aa)
Conjugal transfer protein TrbC n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV01_POLNA
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_cont_500_bf_scaffold_577_16
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15859..16908)
DNA (1050bp) protein (350aa)
Type II secretion system protein E n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV00_POLNA rbh
type II secretion system protein E; K03196 type IV secretion system protein VirB11 rbh
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_cont_500_bf_scaffold_577_17
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16905..17357)
DNA (453bp) protein (151aa)
CopG domain protein DNA-binding domain protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUZ9_POLNA
CopG/DNA-binding domain-containing protein
CopG domain protein DNA-binding domain protein {ECO:0000313|EMBL:ABM39477.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_500_bf_scaffold_577_18
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17354..19345)
DNA (1992bp) protein (664aa)
TRAG family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUZ8_POLNA rbh
TRAG family protein {ECO:0000313|EMBL:ABM39476.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4 rbh
SCNpilot_cont_500_bf_scaffold_577_19
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19632..19874)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUZ7_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM39475.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_500_bf_scaffold_577_20
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19886..20797)
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUZ6_POLNA rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABM39474.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_500_bf_scaffold_577_21
unknown

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comp(20860..21099)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_577_22
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21206..22438)
DNA (1233bp) protein (411aa)
Major facilitator transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX4_9GAMM
Major Facilitator Superfamily protein {ECO:0000313|EMBL:AJZ56350.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
major facilitator transporter
SCNpilot_cont_500_bf_scaffold_577_23
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22475..23173)
DNA (699bp) protein (233aa)
Putative cytochrome c biogenesis protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX3_9GAMM
Cytochrome C biogenesis transmembrane region family protein {ECO:0000313|EMBL:AJZ56257.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
cytochrome c biogenesis protein, transmembrane region
SCNpilot_cont_500_bf_scaffold_577_24
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23257..23529)
DNA (273bp) protein (91aa)
Thioredoxin/glutaredoxin n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX2_9GAMM
Glutaredoxin family protein {ECO:0000313|EMBL:AJZ56031.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
thioredoxin/glutaredoxin
SCNpilot_cont_500_bf_scaffold_577_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23545..24096)
DNA (552bp) protein (184aa)
MerR family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX1_9GAMM
MerR family transcriptional regulator {ECO:0000313|EMBL:EIL86812.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative MerR family regulatory protein
SCNpilot_cont_500_bf_scaffold_577_26
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24186..24413)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX0_9GAMM
Heavy-metal-associated domain protein {ECO:0000313|EMBL:AJZ56452.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
SCNpilot_cont_500_bf_scaffold_577_27
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24498..26954)
DNA (2457bp) protein (819aa)
Copper-translocating P-type ATPase {ECO:0000313|EMBL:AJZ56232.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AJZ56232.1};; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
copA; copper-transporting ATPase CopA (EC:3.6.3.4)
Heavy metal translocating P-type ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHW9_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_577_28
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(27189..27617)
DNA (429bp) protein (143aa)
Transcriptional regulator, MerR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9Y6_ALIDK
MerR family transcriptional regulator
Tax=CG_Rhodocyc_01
SCNpilot_cont_500_bf_scaffold_577_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27688..28038
DNA (351bp) protein (117aa)
Mercuric transport protein n=10 Tax=Proteobacteria RepID=MERT_ALCSP
putative mercuric transport protein
Mercuric transport protein {ECO:0000313|EMBL:AIX66999.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
SCNpilot_cont_500_bf_scaffold_577_30
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28052..28327
DNA (276bp) protein (92aa)
Mercury scavenger protein:Heavy-metal-associated domain n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q820P0_NITEU
merP; mercury scavenger protein; K08364 periplasmic mercuric ion binding protein
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
Displaying items 1-30 of 59 in total

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