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SCNpilot_cont_500_bf_scaffold_656

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_656_1
unknown

Not on your lists

1..597
DNA (597bp) protein (199aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_656_2
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

585..1451
DNA (867bp) protein (289aa)
Putative glucosyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DMC5_9PROT
Putative glucosyltransferase {ECO:0000313|EMBL:CCU63908.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
putative glycosyltransferase
SCNpilot_cont_500_bf_scaffold_656_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1448..2824
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLR5_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU63907.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
beta-1,4-xylanase
SCNpilot_cont_500_bf_scaffold_656_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2852..3874
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCF8_NITMU rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO49446.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein; K09726 hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_656_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3894..4997
DNA (1104bp) protein (368aa)
Oxidoreductase-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCF7_NITMU rbh
oxidoreductase-like protein rbh
Oxidoreductase-like protein {ECO:0000313|EMBL:ABB73564.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_500_bf_scaffold_656_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5029..5919
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCF6_NITMU rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO49444.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_656_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6577..7542
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKA4_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU63906.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_656_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8763..9839
DNA (1077bp) protein (359aa)
UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] rbh
UDP-glucose 4-epimerase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DMC2_9PROT rbh
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KIO49441.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_500_bf_scaffold_656_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9907..11379
DNA (1473bp) protein (491aa)
Mannose-1-phosphate guanylyltransferase (GDP) {ECO:0000313|EMBL:CCU63902.1}; EC=2.7.7.22 {ECO:0000313|EMBL:CCU63902.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (EC:2.7.7.22); K16011 mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] rbh
Mannose-1-phosphate guanylyltransferase (GDP) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLR1_9PROT rbh
SCNpilot_cont_500_bf_scaffold_656_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12064..12633
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCF1_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73570.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_500_bf_scaffold_656_11
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12644..13228)
DNA (585bp) protein (195aa)
hypothetical protein id=12496888 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Dechloromonas_61_78
SCNpilot_cont_500_bf_scaffold_656_12
unknown

Not on your lists

comp(14458..14667)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_656_13
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14621..14980)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WTS0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EON10623.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_656_14
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(15034..15495)
DNA (462bp) protein (154aa)
id=3596810 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
SCNpilot_cont_500_bf_scaffold_656_15
unknown

Not on your lists

comp(15492..15704)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_656_16
unknown

Not on your lists

comp(15810..16160)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_656_17
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16157..16600)
DNA (444bp) protein (148aa)
Putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PSQ3_9BURK
Putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain {ECO:0000313|EMBL:ELX13863.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
SCNpilot_cont_500_bf_scaffold_656_18
unknown

Not on your lists

16634..16831
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_656_19
unknown

Not on your lists

comp(16836..18662)
DNA (1827bp) protein (609aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_656_20
unknown

Not on your lists

comp(18664..19155)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI0002EA65FF
SCNpilot_cont_500_bf_scaffold_656_21
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(19163..20422)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HNI6_9SPHN
major tail fiber protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_500_bf_scaffold_656_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20392..21291)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAL5_NOVAD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_cont_500_bf_scaffold_656_23
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21288..24755)
DNA (3468bp) protein (1156aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKZ3_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
SCNpilot_cont_500_bf_scaffold_656_24
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25210..25611)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HIC0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99124.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_656_25
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25701..26210)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00037FB011
Uncharacterized protein {ECO:0000313|EMBL:AHE52633.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
SCNpilot_cont_500_bf_scaffold_656_26
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26242..26703)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HNI0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99123.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_656_27
CG_Mariprof_02, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26800..27246)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZCA6_AZOL4
hypothetical protein
Tax=CG_Mariprof_02
SCNpilot_cont_500_bf_scaffold_656_28
unknown

Not on your lists

comp(27246..27866)
DNA (621bp) protein (207aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_656_29
unknown

Not on your lists

comp(27866..28141)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_656_30
unknown

Not on your lists

comp(28148..28420)
DNA (273bp) protein (91aa)

This feature has no annotations

Displaying items 1-30 of 76 in total

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