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SCNpilot_cont_500_bf_scaffold_19338

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_19338_1
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(32..1339)
DNA (1308bp) protein (436aa)
FAD-dependent pyridine nucleotide-disulfide; K03885 NADH dehydrogenase [EC:1.6.99.3]
hypothetical protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002EF89A4 rbh
NADH dehydrogenase {ECO:0000313|EMBL:GAN80347.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
SCNpilot_cont_500_bf_scaffold_19338_2
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1789..2511)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI00036B2249 rbh
hypothetical protein; K07491 putative transposase
Tax=CG_Beta_01
SCNpilot_cont_500_bf_scaffold_19338_3
unknown

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comp(2589..2711)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_19338_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3210..4130)
DNA (921bp) protein (307aa)
RNA polymerase sigma factor RpoS n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF55_9PROT
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
SCNpilot_cont_500_bf_scaffold_19338_5
unknown

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comp(4420..4917)
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_19338_6
unknown

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comp(5315..5458)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_19338_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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6032..6778
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFI9_9PROT rbh
Methyltransferase type 12 {ECO:0000313|EMBL:KIO48506.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_19338_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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6787..7728
DNA (942bp) protein (314aa)
Bile acid:sodium symporter n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GIV2_NITSI rbh
Transporter {ECO:0000313|EMBL:KIO48507.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Bile acid:sodium symporter; K03453 bile acid:Na+ symporter, BASS family rbh
Displaying 8 items

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