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SCNpilot_cont_500_bf_scaffold_1725_6

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 49 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(4497..5510)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 337.0
  • Bit_score: 605
  • Evalue 5.30e-170
dihydrouridine synthase TIM-barrel protein nifR3; K05540 tRNA-dihydrouridine synthase B [EC:1.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 337.0
  • Bit_score: 602
  • Evalue 5.90e-170
  • rbh
tRNA-dihydrouridine synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF86_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 337.0
  • Bit_score: 603
  • Evalue 1.40e-169
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGCAGATCGGTTCTCATATTCTCAAGAATAATCTTATCGTCGCACCCATGGCGGGGGTCACCGACCGTCCGTTTCGCCAGTTGTGCAAGAGCATGGGGGCGGGCATGGCCGTGTCGGAAATGGTATCCAGCAACTCCTTGTTGTGGGGTTCCGAAAAGACTCGTCGCCGCGCCAACCATGAGGGAGAGGTAGACCCGATCTCGGTGCAGATCGCTGGTGCCGATCCGGTGATGATGGCGGAAGCCGCCCGCTACAATGTCGCGCAGGGGGCGCAGATCATCGATATCAATATGGGATGCCCCGCCAAGAAGATTTGCAACGTGATGGCCGGATCCGCATTGTTGCAGGATGAGCCGCTGGTGGGAAAAATACTGGATGCCGTGGTCGGAGCGGTCGAGGTGCCGGTCACGCTCAAGATCCGCACCGGCTGGGACAAGCAGCATAAAAATGCGCTCGCCGTCGCACATATTGCCGAGAGCGCGGGAATTCAGGCGCTCGCCATACACGGACGCACGCGCGCTTGCGCCTATACCGGCCATGCCGAGTATGACACTATCGCCATGGTAAAAGCTGCCATCAACATACCAGTTGTCGCTAATGGCGACATCAATACGCCGGAGCAGGCGAGGCGGATACTTGACTATACGGGAGCCGACGCGGTGATGATCGGCCGGGCAGCGCAGGGACGGCCCTGGATATTTCGCGAGATCAGCCACTATCTGGAGACCGGCAAACATATCCCGTTACCGGAAGTAGCCGAGATTCACCGTGTTCTCATCGATCATCTGCACGACCTGTATGAATTTTACGGTGAATACTCCGGAGTGCGGATCGCCCGCAAGCACATCTCCTGGTATACGAAGGGTCTGGTCGGCTCCGCCGTGTTCCGCCATCAGATGAATCAGTTGCAAAGCGCCGAGCAGCAATTGGCGGCGGTTGACGAATTTTTCCACACGCTTGCCGCTTACGGACGCAGATTGGTCTATGCTGAGTCTGAGGAGCTGGTCGCATGA
PROTEIN sequence
Length: 338
MQIGSHILKNNLIVAPMAGVTDRPFRQLCKSMGAGMAVSEMVSSNSLLWGSEKTRRRANHEGEVDPISVQIAGADPVMMAEAARYNVAQGAQIIDINMGCPAKKICNVMAGSALLQDEPLVGKILDAVVGAVEVPVTLKIRTGWDKQHKNALAVAHIAESAGIQALAIHGRTRACAYTGHAEYDTIAMVKAAINIPVVANGDINTPEQARRILDYTGADAVMIGRAAQGRPWIFREISHYLETGKHIPLPEVAEIHRVLIDHLHDLYEFYGEYSGVRIARKHISWYTKGLVGSAVFRHQMNQLQSAEQQLAAVDEFFHTLAAYGRRLVYAESEELVA*