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SCNpilot_cont_500_bf_scaffold_4072

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4072_1
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..505
DNA (504bp) protein (168aa)
peptide ABC transporter substrate-binding protein (EC:3.6.3.24); K02035 peptide/nickel transport system substrate-binding protein
ABC transporter peptide-binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMZ6_9PROT
ABC transporter peptide-binding protein {ECO:0000313|EMBL:EDP65944.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
SCNpilot_cont_500_bf_scaffold_4072_2
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(510..929)
DNA (420bp) protein (140aa)
Putative permease n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IGM1_AZOC5
permease
Putative permease {ECO:0000313|EMBL:BAF86105.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_4072_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1835..2698
DNA (864bp) protein (288aa)
Predicted succinylglutamate desuccinylase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0KFH7_CUPNH
h16_A0092; succinylglutamate desuccinylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4072_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2667..4268)
DNA (1602bp) protein (534aa)
Virulence factor MVIN-like protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U0C4_9PROT rbh
Virulence factor MVIN-like; K03980 virulence factor rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4072_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4419..5684)
DNA (1266bp) protein (422aa)
3-hydroxybenzoate 6-hydroxylase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TQC6_TISMK
mhbM; 3-hydroxybenzoate 6-hydroxylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4072_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5691..6104)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A1C9_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4072_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6115..6339)
DNA (225bp) protein (75aa)
UPF0434 protein GbCGDNIH1_0252 n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Y252_GRABC
cytosolic protein; K09791 hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4072_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6403..7131)
DNA (729bp) protein (243aa)
Peptidase S16 lon protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NX17_AZOS1
peptidase S16 lon protein; K07157
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4072_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7151..8077)
DNA (927bp) protein (309aa)
Thioredoxin n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z040_9BRAD
thioredoxin
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4072_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8252..8425)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0YP80_9CHLO
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4072_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8447..8656)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI00037D1D7F
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4072_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8595..9830)
DNA (1236bp) protein (412aa)
L-carnitine dehydratase/bile acid-inducible protein F id=4766458 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4072_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9831..10760)
DNA (930bp) protein (310aa)
L-carnitine dehydratase/bile acid-inducible protein F (EC:2.8.3.16); K07749 formyl-CoA transferase [EC:2.8.3.16]
CAIB/BAIF family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W8K7_9CAUL
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 13 items

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