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SCNpilot_cont_500_bf_scaffold_4165

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4165_1
unknown

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comp(1..180)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4165_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(177..1547)
DNA (1371bp) protein (457aa)
amidase (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] rbh
amidotransferase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00035D0BC3 rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4165_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1578..2246
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8APB9_AZOBR
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4165_4
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2247..3044
DNA (798bp) protein (266aa)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; EC=3.1.4.17 {ECO:0000256|HAMAP-Rule:MF_00905};; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TIP1_TISMK rbh
metallophosphoesterase rbh
SCNpilot_cont_500_bf_scaffold_4165_5
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3111..3764)
DNA (654bp) protein (218aa)
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64); K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
Methyltransferase type 12 n=1 Tax=Thiocapsa marina 5811 RepID=F9U6A0_9GAMM
Methyltransferase type 12 {ECO:0000313|EMBL:EGV20673.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
SCNpilot_cont_500_bf_scaffold_4165_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3832..5454)
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PLX1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41759.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
low-affinity inorganic phosphate transporter; K03306 inorganic phosphate transporter, PiT family rbh
SCNpilot_cont_500_bf_scaffold_4165_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5572..6492
DNA (921bp) protein (307aa)
Transglutaminase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JJ05_9PROT rbh
Transglutaminase {ECO:0000313|EMBL:EKE70554.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
transglutaminase-like
SCNpilot_cont_500_bf_scaffold_4165_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6461..7276
DNA (816bp) protein (272aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4165_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7273..8799
DNA (1527bp) protein (509aa)
Transmembrane protein, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IYJ1_RHOCS
transmembrane protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4165_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8923..10188
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Halomonas sp. BJGMM-B45 RepID=UPI0003AE87B4
undecaprenyl-galactosyl transferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4165_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10205..12067
DNA (1863bp) protein (621aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] rbh
Asparagine synthetase n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QM03_METTR rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4165_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12075..13175
DNA (1101bp) protein (367aa)
group 1 glycosyl transferase, partial n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B635D4
glycosyl transferases group 1 family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4165_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13172..14005
DNA (834bp) protein (278aa)
O-antigen export system permease protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVN6_SYNAS rbh
o-antigen export system permease; K09690 lipopolysaccharide transport system permease protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4165_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14008..15300
DNA (1293bp) protein (431aa)
teichoic-acid-transporting AtPase (EC:3.6.3.40)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003649FBC rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_4165_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15309..16088
DNA (780bp) protein (260aa)
glycosyl transferase, group 1 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C34EB
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 15 items

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