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SCNpilot_cont_500_bf_scaffold_5220

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5220_1
unknown

Not on your lists

comp(3..134)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5220_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189..1208
DNA (1020bp) protein (340aa)
2-alkenal reductase (EC:1.3.1.74) id=14627401 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
alcohol dehydrogenase; K07119
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_5220_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1360..2184
DNA (825bp) protein (275aa)
Lyzozyme M1 n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FMZ3_PHAMO
Lyzozyme M1; K07273 lysozyme
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_5220_4
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2241..3392)
DNA (1152bp) protein (384aa)
Chaperone protein HtpG n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HD16_9BRAD
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
Heat shock protein Hsp90-like protein; K04079 molecular chaperone HtpG
SCNpilot_cont_500_bf_scaffold_5220_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3431..4996)
DNA (1566bp) protein (522aa)
Alpha/beta hydrolase fold protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXW7_9RHIZ rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EHK54443.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
alpha/beta hydrolase fold protein rbh
SCNpilot_cont_500_bf_scaffold_5220_6
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5077..6066)
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T6Q7_ALCXX
Uncharacterized protein {ECO:0000313|EMBL:ETR75979.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5220_7
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6123..7673)
DNA (1551bp) protein (517aa)
cyclohexanone monooxygenase n=1 Tax=Rhodococcus rhodochrous RepID=UPI00036E32D6
FAD dependent oxidoreductase {ECO:0000313|EMBL:EHJ59492.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5220_8
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7897..8787
DNA (891bp) protein (297aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J2ATL7_9RHIZ rbh
Transcriptional regulator {ECO:0000313|EMBL:EJJ26710.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
transcriptional regulator, LysR family
SCNpilot_cont_500_bf_scaffold_5220_9
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8822..9478)
DNA (657bp) protein (219aa)
Calcium/proton antiporter n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0A9P8_COLFT
chaA; Calcium/proton antiporter; K07300 Ca2+:H+ antiporter
Calcium/proton antiporter {ECO:0000313|EMBL:AEK62671.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
SCNpilot_cont_500_bf_scaffold_5220_10
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9475..9873)
DNA (399bp) protein (133aa)
Calcium/proton antiporter n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0A9P8_COLFT
chaA; Calcium/proton antiporter; K07300 Ca2+:H+ antiporter
Calcium/proton antiporter {ECO:0000313|EMBL:AEK62671.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
SCNpilot_cont_500_bf_scaffold_5220_11
unknown

Not on your lists

10721..11176
DNA (456bp) protein (152aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5220_12
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11696..12307)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UHV0_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:KFC66250.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5220_13
unknown

Not on your lists

comp(12354..12557)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5220_14
unknown

Not on your lists

comp(12636..13400)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Halomonas zhanjiangensis RepID=UPI0003665FD6
SCNpilot_cont_500_bf_scaffold_5220_15
unknown

Not on your lists

comp(13416..14594)
DNA (1179bp) protein (393aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5220_16
Acinetobacter bereziniae, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14676..15785
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Acinetobacter bereziniae CIP 70.12 RepID=N9DPS3_ACIBZ
Uncharacterized protein {ECO:0000313|EMBL:ENW00248.1}; TaxID=1217650 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter bereziniae CIP 70.12.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5220_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15811..16974)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036BBC7E
phytanoyl-CoA dioxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_5220_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17156..17866)
DNA (711bp) protein (237aa)
IclR family transcriptional regulator, acetate operon repressor n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IJT4_9BRAD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_5220_19
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18320..19882)
DNA (1563bp) protein (521aa)
Dihydroxy-acid dehydratase n=1 Tax=Chondrus crispus RepID=R7QIR0_CHOCR
Bradyrhizobium elkanii strain UASWS1015 Contig183, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46052.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
dihydroxy-acid dehydratase 2-like
SCNpilot_cont_500_bf_scaffold_5220_20
unknown

Not on your lists

comp(20662..21690)
DNA (1029bp) protein (343aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5220_21
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21981..23672)
DNA (1692bp) protein (564aa)
acylase ACY 1; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] rbh
gamma-glutamyltransferase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000367E84E rbh
Gamma-glutamyltransferase {ECO:0000313|EMBL:ETR75699.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCNpilot_cont_500_bf_scaffold_5220_22
unknown

Not on your lists

comp(23697..24188)
DNA (492bp) protein (164aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5220_23
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24185..24766)
DNA (582bp) protein (194aa)
phospholipid hydroperoxide glutathione peroxidase; K00432 glutathione peroxidase [EC:1.11.1.9]
Glutathione peroxidase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W144_MAGSA
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
SCNpilot_cont_500_bf_scaffold_5220_24
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24993..26066)
DNA (1074bp) protein (358aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VVC3_9BURK rbh
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:EJN10187.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
amidohydrolase 2
SCNpilot_cont_500_bf_scaffold_5220_25
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26070..27068)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RN73_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH11255.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
extra-cytoplasmic solute receptor
SCNpilot_cont_500_bf_scaffold_5220_26
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27320..28033)
DNA (714bp) protein (238aa)
Dimethylmenaquinone methyltransferase n=2 Tax=Acidiphilium RepID=A5G1D1_ACICJ
Putative aldolase {ECO:0000313|EMBL:KDM66213.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
putative aldolase
SCNpilot_cont_500_bf_scaffold_5220_27
unknown

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comp(28123..28254)
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 27 items

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