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SCNpilot_cont_500_bf_scaffold_2116

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Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2116_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1155)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SGQ5_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2116_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1157..1606)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002DFB821
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2116_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2001..2720
DNA (720bp) protein (240aa)
GntR domain-containing protein id=3187969 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia sp. YI23 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A0034; GntR family transcriptional regulator
Tax=GWA2_Rokubacteria_73_35_curated
SCNpilot_cont_500_bf_scaffold_2116_4
bacterium YEK0313, Bacteria

Not on your lists

2926..4158
DNA (1233bp) protein (411aa)
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein {ECO:0000313|EMBL:CEJ15716.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter, periplasmic branched chain amino acid binding protein id=4012790 bin=GWF2_Methylomirabilis_70_14 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_2116_5
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4239..5189
DNA (951bp) protein (317aa)
Inner-membrane translocator n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UNW6_METS4
LivH protein {ECO:0000313|EMBL:BAQ44079.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_2116_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5186..6382
DNA (1197bp) protein (399aa)
Inner-membrane translocator id=2864479 bin=GWA2_Methylomirabilis_73_35 species=Sulfitobacter guttiformis genus=Sulfitobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
Tax=GWA2_Rokubacteria_73_35_curated
SCNpilot_cont_500_bf_scaffold_2116_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6379..7152
DNA (774bp) protein (258aa)
ABC transporter related id=4012781 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
amino-acid atp-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
SCNpilot_cont_500_bf_scaffold_2116_8
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7152..7571
DNA (420bp) protein (140aa)
mannosyltransferase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D9E980
ABC transport system ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
Bradyrhizobium elkanii strain UASWS1015 Contig166, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51234.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_500_bf_scaffold_2116_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7529..7846
DNA (318bp) protein (106aa)
ABC transporter related protein id=4012738 bin=GWF2_Methylomirabilis_70_14 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino-acid ATP-binding ABC transporter protein; K01996 branched-chain amino acid transport system ATP-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
SCNpilot_cont_500_bf_scaffold_2116_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7935..8408
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD042A
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2116_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8413..8961
DNA (549bp) protein (183aa)
Transcriptional regulator,TetR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDD3_PHEZH
TetR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2116_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9011..10231
DNA (1221bp) protein (407aa)
O-acetylhomoserine sulfhydrylase (EC:2.5.1.49); K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2HEI5_9RHOB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2116_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10241..11578
DNA (1338bp) protein (446aa)
Genomic scaffold, D445_Final2 n=1 Tax=Bordetella bronchiseptica D445 RepID=K4TCX2_BORBO
dioxygenase rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2116_14
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11644..12252
DNA (609bp) protein (203aa)
Glutathione S-transferase {ECO:0000313|EMBL:BAN70233.1}; EC=2.5.1.18 {ECO:0000313|EMBL:BAN70233.1};; TaxID=1248727 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
gst; hypothetical protein; K00799 glutathione S-transferase [EC:2.5.1.18]
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002FD779B
SCNpilot_cont_500_bf_scaffold_2116_15
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12272..13540)
DNA (1269bp) protein (423aa)
Putative permease of the major facilitator superfamily MFS-1 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AL73_AZOBR
putative permease of the major facilitator superfamily MFS-1
Putative permease of the major facilitator superfamily MFS-1 {ECO:0000313|EMBL:CCC97985.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_cont_500_bf_scaffold_2116_trna_1
unknown

Not on your lists

13649..13722
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_2116_16
Mycobacterium triplex, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13727..14803)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Legionella longbeachae serogroup 1 (strain NSW150) RepID=D3HQ55_LEGLN
Uncharacterized protein {ECO:0000313|EMBL:CDO90940.1}; TaxID=47839 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium triplex.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2116_17
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14851..16071
DNA (1221bp) protein (407aa)
MFS transporter n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00035E537C
MFS transporter {ECO:0000313|EMBL:KFA88393.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
tetA; tetracycline resistance protein; K08151 MFS transporter, DHA1 family, tetracycline resistance protein
SCNpilot_cont_500_bf_scaffold_2116_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16034..16339)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SKR4_RHOPH
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2116_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16528..17055)
DNA (528bp) protein (176aa)
Transcriptional regulator, MerR family protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMR3_RHOCS
transcriptional regulator, MerR family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2116_20
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17092..17397)
DNA (306bp) protein (102aa)
Integration host factor subunit alpha n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5K0_AZOL4
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ihfA; integration host factor alpha-subunit (IHF-alpha); K04764 integration host factor subunit alpha
SCNpilot_cont_500_bf_scaffold_2116_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17538..18509)
DNA (972bp) protein (324aa)
fabH; 3-oxoacyl-ACP synthase (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] rbh
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y0K9_9PROT rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2116_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18506..19582)
DNA (1077bp) protein (359aa)
plsX; putative glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] rbh
Phosphate acyltransferase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=PLSX_RHOCS rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2116_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19635..19829)
DNA (195bp) protein (65aa)
50S ribosomal protein L32 n=2 Tax=Azospirillum lipoferum RepID=D3NTD1_AZOS1
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2116_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19903..20424)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVN2_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2116_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20497..20991)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000313F03C
ubiquinol-cytochrome C chaperone
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2116_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21093..21578
DNA (486bp) protein (162aa)
SmpA/OmlA domain-containing protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K452_9PROT
putative outer membrane lipoprotein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2116_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21651..23759)
DNA (2109bp) protein (703aa)
hppA; membrane-bound proton-translocating pyrophosphatase; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] rbh
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HX90_PARL1 rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2116_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23908..25140)
DNA (1233bp) protein (411aa)
MFS permease n=1 Tax=Oceanibaculum indicum P24 RepID=K2J3Z2_9PROT
putative Permease of the major facilitator superfamily
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2116_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25219..26205)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037E08A6
thiL; thiamin-monophosphate kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Displaying items 1-30 of 67 in total

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