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SCNpilot_cont_500_bf_scaffold_2193

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2193_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..573)
DNA (573bp) protein (191aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
Peptidyl-tRNA hydrolase n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FW31_PHAMO
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2193_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(601..1299)
DNA (699bp) protein (233aa)
50S ribosomal protein L25 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ITK2_RHOCS
50S ribosomal protein L25/general stress protein Ctc; K02897 large subunit ribosomal protein L25
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2193_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1378..2400)
DNA (1023bp) protein (341aa)
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] rbh
ribose-phosphate pyrophosphokinase n=1 Tax=Kiloniella laminariae RepID=UPI000382321F rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2193_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2517..2816
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK03_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63444.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_2193_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2843..4315)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J0K4_9PROT rbh
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2193_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4411..5820)
DNA (1410bp) protein (470aa)
Putative Beta-lactamase family protein 6-aminohexanoate-dimer hydrolase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TPZ1_9BRAD rbh
Bradyrhizobium elkanii strain UASWS1015 Contig170, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50377.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
putative Beta-lactamase family protein rbh
SCNpilot_cont_500_bf_scaffold_2193_7
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5891..7060)
DNA (1170bp) protein (390aa)
AraC family transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036201B2 rbh
transcriptional regulatory protein AraC family rbh
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
SCNpilot_cont_500_bf_scaffold_2193_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7057..8682)
DNA (1626bp) protein (542aa)
acyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036FE58B
aidB; isovaleryl CoA dehydrogenase; K09456 putative acyl-CoA dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2193_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8788..9324
DNA (537bp) protein (179aa)
Membrane protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GU04_9BRAD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2193_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9354..9992
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F3F8
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2193_11
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9989..11185
DNA (1197bp) protein (399aa)
Beta-lactamase n=2 Tax=Paenibacillus mucilaginosus RepID=H6NPZ9_9BACL rbh
beta-lactamase rbh
Beta-lactamase {ECO:0000313|EMBL:AFC31190.1}; TaxID=1116391 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus 3016.;"
SCNpilot_cont_500_bf_scaffold_2193_12
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11204..11620
DNA (417bp) protein (139aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQC3_9BACT
3-demethylubiquinone-9 3-methyltransferase; K04750 PhnB protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCNpilot_cont_500_bf_scaffold_2193_13
Pseudomonas sp. BAY1663, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11699..12148)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI0003719867
Uncharacterized protein {ECO:0000313|EMBL:EXF43094.1}; TaxID=1439940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. BAY1663.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2193_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12244..13476)
DNA (1233bp) protein (411aa)
aminotransferase (EC:2.6.1.-) rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PNL6_9BRAD rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2193_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13545..14921)
DNA (1377bp) protein (459aa)
glutamate synthase n=1 Tax=Afipia birgiae RepID=UPI000309460B
PA3602; ferredoxin-dependent glutamate synthase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 15 items

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