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SCNpilot_cont_500_bf_scaffold_2221

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2221_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..796
DNA (795bp) protein (265aa)
Tetratricopeptide TPR_2 n=2 Tax=Oligotropha carboxidovorans RepID=B6JGB1_OLICO
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2221_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1262..3613
DNA (2352bp) protein (784aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00037EF771
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2221_3
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

3660..5909
DNA (2250bp) protein (750aa)
putative Chase2 sensor protein; K01768 adenylate cyclase [EC:4.6.1.1]
guanylate cyclase n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B43A7F rbh
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
SCNpilot_cont_500_bf_scaffold_2221_4
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6008..9112)
DNA (3105bp) protein (1035aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000304D08B rbh
Cation/multidrug efflux pump {ECO:0000313|EMBL:EJN08443.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
multidrag resistance protein rbh
SCNpilot_cont_500_bf_scaffold_2221_5
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9125..10267)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F9132 rbh
RND transporter {ECO:0000313|EMBL:KGM34070.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
RND family efflux transporter MFP subunit rbh
SCNpilot_cont_500_bf_scaffold_2221_6
Pseudomonas batumici, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10273..11523)
DNA (1251bp) protein (417aa)
RND transporter n=2 Tax=Pseudomonas fluorescens RepID=UPI00036BF6A7
ABC-type export system, outer membrane channel protein {ECO:0000313|EMBL:KIH82838.1}; TaxID=226910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas batumici.;"
ABC-type export system, outer membrane channel protein
SCNpilot_cont_500_bf_scaffold_2221_7
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11711..12418)
DNA (708bp) protein (236aa)
Transcriptional regulator, TetR family n=1 Tax=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) RepID=Q0BAJ1_BURCM
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABI88832.1}; TaxID=339670 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia; cepacia (strain AMMD)).;"
SCNpilot_cont_500_bf_scaffold_2221_8
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12498..13910)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QVR8_RALPI rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW95024.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
mmge/prpd family protein rbh
SCNpilot_cont_500_bf_scaffold_2221_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14063..14944)
DNA (882bp) protein (294aa)
Putative peptidoglycan-binding LysM:Peptidase M23/M37 family (NlpD/LppB-like) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T7G7_9BRAD
peptidase M23
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2221_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15019..15651)
DNA (633bp) protein (211aa)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LUW5_9PROT
pcm; protein-L-isoaspartate O-methyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2221_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15682..16479)
DNA (798bp) protein (266aa)
surE; stationary phase survival protein SurE; K03787 5'-nucleotidase [EC:3.1.3.5]
5'-nucleotidase SurE n=1 Tax=Oceanibaculum indicum P24 RepID=K2JMG9_9PROT rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2221_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16476..17762)
DNA (1287bp) protein (429aa)
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11] rbh
Serine--tRNA ligase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JJV7_9PROT rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2221_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17765..18583)
DNA (819bp) protein (273aa)
Sec-independent protein translocase protein TatC n=1 Tax=alpha proteobacterium BAL199 RepID=A8TKT9_9PROT
tatC; TatABCE protein translocation system subunit
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2221_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18654..19115)
DNA (462bp) protein (154aa)
Sec-independent protein translocase protein TatB n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZBX9_AZOL4
tatB; TatABCE protein translocation system subunit; K03117 sec-independent protein translocase protein TatB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2221_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19166..19423)
DNA (258bp) protein (86aa)
Sec-independent protein translocase protein TatA n=1 Tax=alpha proteobacterium BAL199 RepID=A8TKT6_9PROT
sec-independent protein translocase protein TatA; K03116 sec-independent protein translocase protein TatA
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2221_16
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19535..20926)
DNA (1392bp) protein (464aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1L1_9PROT
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
transcription regulator; K06024 segregation and condensation protein B
SCNpilot_cont_500_bf_scaffold_2221_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20938..21828)
DNA (891bp) protein (297aa)
Segregation and condensation protein A, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISL6_RHOCS
scpA; segregation and condensation protein A; K05896 segregation and condensation protein A
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2221_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21903..22925)
DNA (1023bp) protein (341aa)
beta-glucosidase-like protein (EC:3.2.1.21); K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
Beta-glucosidase-like protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISL4_RHOCS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2221_19
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22999..23859)
DNA (861bp) protein (287aa)
Protein TonB, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISL3_RHOCS
tonB; protein TonB
Protein TonB, putative {ECO:0000313|EMBL:ACI98449.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_cont_500_bf_scaffold_2221_20
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23925..25667)
DNA (1743bp) protein (581aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] rbh
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Arginine--tRNA ligase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISL2_RHOCS rbh
SCNpilot_cont_500_bf_scaffold_2221_21
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25760..26230)
DNA (471bp) protein (157aa)
deoxyguanosinetriphosphate triphosphohydrolase; K01129 dGTPase [EC:3.1.5.1]
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AFY5_9PROT
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
SCNpilot_cont_500_bf_scaffold_2221_22
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26179..26871)
DNA (693bp) protein (231aa)
deoxyguanosinetriphosphate triphosphohydrolase; K01129 dGTPase [EC:3.1.5.1]
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TEB3_PARBH
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
SCNpilot_cont_500_bf_scaffold_2221_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26965..27396)
DNA (432bp) protein (144aa)
Universal stress protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q318_9RHOO
usp; universal stress protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2221_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27402..28127)
DNA (726bp) protein (242aa)
Integral membrane protein, TerC family n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HYA0_RUBGI
TerC family integral membrane protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2221_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28248..28751
DNA (504bp) protein (168aa)
xanthine-guanine phosphoribosyltransferase; K00769 xanthine phosphoribosyltransferase [EC:2.4.2.22]
Xanthine phosphoribosyltransferase n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=XGPT_DESDG
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2221_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28748..29761
DNA (1014bp) protein (338aa)
alcohol dehydrogenase (EC:1.6.5.5)
Alcohol dehydrogenase, zinc-binding domain protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J9M7_NOSP7
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2221_27
bacterium YEK0313, Bacteria

Not on your lists

29777..30751
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPM2_9RHIZ
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:CEJ14153.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
extra-cytoplasmic solute receptor
SCNpilot_cont_500_bf_scaffold_2221_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30761..32797
DNA (2037bp) protein (679aa)
Short chain dehydrogenase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AFV4_9PROT rbh
short chain dehydrogenase rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2221_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32836..33720
DNA (885bp) protein (295aa)
Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate (2,4-D) dioxygenase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZLU7_9BRAD
alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate (2,4-D) dioxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2221_30
unknown

Not on your lists

33729..34229
DNA (501bp) protein (167aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

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