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SCNpilot_cont_500_bf_scaffold_2590

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2590_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(232..2112)
DNA (1881bp) protein (627aa)
dnaG; DNA primase; K02316 DNA primase [EC:2.7.7.-] rbh
DNA primase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MM70_9PROT rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2590_2
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2322..2699)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D3B3_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:KGT80994.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2590_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2727..3182)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZSK7_9PROT
hypothetical protein; K09117 hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2590_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3387..4571
DNA (1185bp) protein (395aa)
carA; carbamoyl-phosphate synthase small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
Carbamoyl-phosphate synthase small chain n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INY3_RHOCS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2590_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4579..7824
DNA (3246bp) protein (1082aa)
carB; carbamoyl phosphate synthase, large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] rbh
Carbamoyl-phosphate synthase large chain n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z2F5_AZOL4 rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2590_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7918..8391
DNA (474bp) protein (158aa)
transcription elongation factor GreA n=1 Tax=Novispirillum itersonii RepID=UPI0003655E4F
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2590_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8412..8987)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GRA2_9BRAD
intracellular septation protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2590_8
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9138..9440
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QFE6_RHOPT
Uncharacterized protein {ECO:0000313|EMBL:AIC29514.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2590_9

Not on your lists

9440..9862
DNA (423bp) protein (141aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PilT protein domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IP49_XANP2
PilT domain-containing protein; K07062
SCNpilot_cont_500_bf_scaffold_2590_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9884..10360)
DNA (477bp) protein (159aa)
Transcriptional regulator n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W9K6_MAGSA
transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2590_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10538..11509
DNA (972bp) protein (324aa)
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] rbh
Thioredoxin reductase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRI4_RHOCS rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2590_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11537..12427
DNA (891bp) protein (297aa)
Transcriptional regulator, LysR family n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H8X0_9PROT
transcriptional regulator, LysR family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2590_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12835..13152
DNA (318bp) protein (106aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 13 items

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