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SCNpilot_cont_500_bf_scaffold_2645

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2645_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..252)
DNA (252bp) protein (84aa)
Peptide chain release factor 1 n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HYR7_AZOC5
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2645_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(254..1486)
DNA (1233bp) protein (411aa)
histidyl-tRNA synthase n=1 Tax=Thalassospira lucentensis RepID=UPI0003B793B3 rbh
hisS; Histidyl-tRNA synthetase, class IIa
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2645_3
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1541..2677)
DNA (1137bp) protein (379aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JBM9_9PROT rbh
SCNpilot_cont_500_bf_scaffold_2645_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2769..3905)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NQU7_AZOS1
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2645_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3986..6217)
DNA (2232bp) protein (744aa)
signal transduction protein; K08484 phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] rbh
Signal transduction protein containing GAF and PtsI domains n=1 Tax=Oceanibaculum indicum P24 RepID=K2K412_9PROT rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2645_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6480..7727)
DNA (1248bp) protein (416aa)
lysC; aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] rbh
Aspartokinase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NQS3_AZOS1 rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2645_7
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7806..8603
DNA (798bp) protein (266aa)
ubiG; 3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64); K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUU0_RHOCS
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
SCNpilot_cont_500_bf_scaffold_2645_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8631..9146)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B67B77
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2645_9
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9227..9736
DNA (510bp) protein (170aa)
Tellurite resistance protein TehB n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJT2_AZOSU
Tellurite resistance protein TehB
Tellurite resistance protein TehB {ECO:0000313|EMBL:AEV26556.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_cont_500_bf_scaffold_2645_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9915..10256)
DNA (342bp) protein (114aa)
Carbon-nitrogen hydrolase family protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y230_9PROT
putative nitrilase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2645_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10196..10687)
DNA (492bp) protein (164aa)
Bifunctional nitrilase/cyanide hydratase/apolipoprotein N-acyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J1H9_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2645_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10697..10957)
DNA (261bp) protein (87aa)
Glutaredoxin n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HJU7_9SPHN
glutaredoxin; K03676 glutaredoxin 3
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2645_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10980..11702)
DNA (723bp) protein (241aa)
Putative phosphoribosyl transferase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6D3_AZOL4
putative phosphoribosyl transferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2645_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11881..12792
DNA (912bp) protein (304aa)
SAM-dependent methyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K5Z7_9PROT rbh
putative SAM-dependent methyltransferase rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2645_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12796..13620
DNA (825bp) protein (275aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2645_16
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13728..14180)
DNA (453bp) protein (151aa)
nudG; CTP pyrophosphohydrolase (EC:3.6.1.-); K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
Mutator mutT protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2IVQ1_9RHOB
Mutator mutT protein {ECO:0000313|EMBL:EKE74491.1}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter baekdonensis B30.;"
SCNpilot_cont_500_bf_scaffold_2645_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14177..15415)
DNA (1239bp) protein (413aa)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4L2_9PROT rbh
argJ; bifunctional arginine biosynthesis protein [glutamate N-acetyltransferase/N-acetylglutamate synthase] rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2645_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15505..16509)
DNA (1005bp) protein (335aa)
putative peptidyl-prolyl isomerase (PpiC-like); K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
Putative peptidyl-prolyl isomerase (PpiC-like) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z855_AZOL4
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2645_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16792..19560
DNA (2769bp) protein (923aa)
Protein translocase subunit SecA n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZNP4_9PROT
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2645_20
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20672..21142
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XNU7_PARAH
Strain MEJ076 contig_45, whole genome shotgun sequence {ECO:0000313|EMBL:KIP98096.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2645_21
bacterium YEK0313, Bacteria

Not on your lists

21142..21777
DNA (636bp) protein (212aa)
OmpA/MotB domain protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YC28_PARAH
Photosystem I P700 chlorophyll a apoprotein A2 {ECO:0000313|EMBL:CEJ11958.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
OmpA/MotB domain protein
SCNpilot_cont_500_bf_scaffold_2645_22
bacterium YEK0313, Bacteria

Not on your lists

21868..22260
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B805_PARDP
Uncharacterized protein {ECO:0000313|EMBL:CEJ10464.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2645_23
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23213..23956
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DEG9_9BURK
acetyltransferase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCNpilot_cont_500_bf_scaffold_2645_24
unknown

Not on your lists

24152..24514
DNA (363bp) protein (121aa)
hypothetical protein, partial n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000373C5C5
SCNpilot_cont_500_bf_scaffold_2645_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24619..25542
DNA (924bp) protein (308aa)
delta 9 acyl-lipid fatty acid desaturase (EC:1.14.19.1); K00507 stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P394_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37052.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_500_bf_scaffold_2645_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25672..26058)
DNA (387bp) protein (129aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 26 items

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