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SCNpilot_cont_500_bf_scaffold_2721

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2721_1
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..214
DNA (213bp) protein (71aa)
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_cont_500_bf_scaffold_2721_2
R_OD1_Kaiserbacteria_54_11b, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

211..3096
DNA (2886bp) protein (962aa)
Putative uncharacterized protein id=4400206 bin=GWA2_Flavobacterium_35_26 species=Dictyostelium discoideum genus=Dictyostelium taxon_order=Dictyosteliida taxon_class=unknown phylum=unknown tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_54_11b_curated
SCNpilot_cont_500_bf_scaffold_2721_3
unknown

Not on your lists

3124..3327
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2721_4
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3299..4678
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KFW1_9BURK
cell wall surface anchor family protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_cont_500_bf_scaffold_2721_5
unknown

Not on your lists

4675..5064
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2721_6
unknown

Not on your lists

5055..6326
DNA (1272bp) protein (424aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2721_7
unknown

Not on your lists

6323..6877
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2721_8
unknown

Not on your lists

6881..7762
DNA (882bp) protein (294aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2721_9
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7767..14507
DNA (6741bp) protein (2247aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei Pakistan 9 RepID=C0Y4S5_BURPE
Uncharacterized protein {ECO:0000313|EMBL:AIO87187.1}; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (Pseudomonas pseudomallei).;"
phosphoribosyl transferase domain protein
SCNpilot_cont_500_bf_scaffold_2721_10
unknown

Not on your lists

14556..14819
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2721_11
Xenorhabdus szentirmaii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14816..15316
DNA (501bp) protein (167aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1427518 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus szentirmaii DSM 16338.;"
lysozyme; K01185 lysozyme [EC:3.2.1.17]
Lysozyme n=1 Tax=Xenorhabdus bovienii (strain SS-2004) RepID=D3UXG0_XENBS
SCNpilot_cont_500_bf_scaffold_2721_12
unknown

Not on your lists

15313..15552
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2721_13
unknown

Not on your lists

15515..15733
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2721_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15743..16153)
DNA (411bp) protein (137aa)
Tricarboxylate binding receptor n=1 Tax=Ralstonia sp. PBA RepID=I9KRN0_9RALS
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_cont_500_bf_scaffold_2721_15
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16688..17461)
DNA (774bp) protein (258aa)
UPF0271 protein MW7_3335 n=1 Tax=Ralstonia sp. PBA RepID=I9W1J8_9RALS
UPF0271 protein MW7_3335 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
LamB/YcsF family protein; K07160 UPF0271 protein
SCNpilot_cont_500_bf_scaffold_2721_16
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17481..18695)
DNA (1215bp) protein (405aa)
diaminopropionate ammonia-lyase; K01751 diaminopropionate ammonia-lyase [EC:4.3.1.15] rbh
diaminopropionate ammonia-lyase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036D668C rbh
Diaminopropionate ammonia-lyase {ECO:0000313|EMBL:KFG70758.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
SCNpilot_cont_500_bf_scaffold_2721_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18812..19276
DNA (465bp) protein (155aa)
Leucine-responsive regulatory protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A7P4_RHIFH
Transcriptional regulator {ECO:0000313|EMBL:KFC63292.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Leucine-responsive regulatory protein
SCNpilot_cont_500_bf_scaffold_2721_18
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19368..21134)
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P4V6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35734.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
putative periplasmic binding ABC transporter protein, sugar binding precursor
SCNpilot_cont_500_bf_scaffold_2721_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21204..21533)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q824_RHOPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF03379.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_500_bf_scaffold_2721_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21543..22352)
DNA (810bp) protein (270aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q131F5_RHOPS
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABE41284.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_500_bf_scaffold_2721_21
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22349..23263)
DNA (915bp) protein (305aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q131F4_RHOPS
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABE41285.1}; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_500_bf_scaffold_2721_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23263..24360)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDR6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36498.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter ATP-binding protein; K02023 multiple sugar transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_2721_23
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24370..25449)
DNA (1080bp) protein (360aa)
SN-glycerol-3-phosphate transport ATP-binding protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QR31_9BRAD
SN-glycerol-3-phosphate transport ATP-binding protein {ECO:0000313|EMBL:EGP06398.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ABC transporter; K02023 multiple sugar transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_2721_24
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25673..26470)
DNA (798bp) protein (266aa)
Transcriptional regulator, DeoR family n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U9Q4_METS4 rbh
DeoR family transcriptional regulator; K02444 DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor rbh
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ACA18999.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_500_bf_scaffold_2721_25
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26695..27900
DNA (1206bp) protein (402aa)
Rieske (2Fe-2S) domain protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KIP3_9GAMM rbh
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:EED33709.1}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
Rieske (2Fe-2S) domain-containing protein
SCNpilot_cont_500_bf_scaffold_2721_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27975..28337
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DHM9_BRAJP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_2721_27
unknown

Not on your lists

28421..28873
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2721_28
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28870..29166
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAM9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC60927.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2721_29
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29738..30724
DNA (987bp) protein (329aa)
Autotransporter adhesin n=1 Tax=Phyllobacterium sp. YR531 RepID=J2W0B8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGM30236.1}; Flags: Fragment;; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2721_30
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30724..33513
DNA (2790bp) protein (930aa)
Rhizobiocin/RTX toxin and hemolysin-type calcium binding protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JJP1_AGRRK
rzcA; rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
Rhizobiocin/RTX toxin and hemolysin-type calcium binding protein {ECO:0000313|EMBL:ACM30133.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
Displaying items 1-30 of 35 in total

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