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SCNpilot_cont_500_bf_scaffold_9657

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9657_1
marine actinobacterium MedAcidi-G2A, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..653)
DNA (651bp) protein (217aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE51705.1}; TaxID=1550400 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2A.;"
ABC transporter related protein id=4051063 bin=GWF2_Methylomirabilis_70_14 species=Methanosaeta thermophila genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_9657_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(688..1887)
DNA (1200bp) protein (400aa)
Coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases n=1 Tax=uncultured alpha proteobacterium HF0130_20P23 RepID=E0XTA1_9PROT
limonene 1,2-monooxygenase rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_9657_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1932..2948)
DNA (1017bp) protein (339aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=4051067 bin=GWF2_Methylomirabilis_70_14 species=Pseudomonas sp. GM67 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
SCNpilot_cont_500_bf_scaffold_9657_4
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2993..4201)
DNA (1209bp) protein (403aa)
formyl-CoA transferase (EC:2.8.3.16)
L-carnitine dehydratase/bile acid-inducible protein F n=2 Tax=Alicycliphilus denitrificans RepID=E8TX75_ALIDB
Uncharacterized protein {ECO:0000313|EMBL:CDM25565.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCNpilot_cont_500_bf_scaffold_9657_5
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4300..5112
DNA (813bp) protein (271aa)
Bacterial regulatory helix-turn-helix protein, LysR family protein 199 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HLK2_ACHXA
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:KGY27993.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
SCNpilot_cont_500_bf_scaffold_9657_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5128..6387
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T6F5_9BRAD rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_9657_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6492..7184
DNA (693bp) protein (231aa)
catD; beta-ketoadipate enol-lactone hydrolase (EC:3.1.1.24)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Herbaspirillum sp. CF444 RepID=J2L2C4_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_9657_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7304..8251
DNA (948bp) protein (316aa)
adenylate cyclase n=1 Tax=Rhizobium mongolense RepID=UPI0003B36920
adenylate/guanylate cyclase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_9657_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8248..8664
DNA (417bp) protein (139aa)
Family 3 adenylate cyclase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL88_9RHIZ
cyaH; adenylate/guanylate cyclase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_9657_10
unknown

Not on your lists

comp(8549..9169)
DNA (621bp) protein (207aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_9657_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9318..10151
DNA (834bp) protein (278aa)
Family 3 adenylate cyclase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL88_9RHIZ
adenylate/guanylate cyclase protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_9657_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10198..11070)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QN33_NOSS7
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_9657_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11093..11779)
DNA (687bp) protein (229aa)
hypothetical protein id=14426719 bin=bin1_lowGC species=Methylosarcina fibrata genus=Methylosarcina taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_9657_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11776..12045)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000370A5D7
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 14 items

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