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SCNpilot_cont_500_bf_scaffold_659

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_659_trna_1
unknown

Not on your lists

1..72
DNA (72bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_659_1
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(282..1466)
DNA (1185bp) protein (395aa)
MFS transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B4AB7
MFS transporter {ECO:0000313|EMBL:KKB79039.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
major facilitator superfamily protein; K08151 MFS transporter, DHA1 family, tetracycline resistance protein
SCNpilot_cont_500_bf_scaffold_659_2
unknown

Not on your lists

comp(1463..2497)
DNA (1035bp) protein (345aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_659_3
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2937..3416)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2T9B4_BURPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD21016.1}; Flags: Precursor;; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
SCNpilot_cont_500_bf_scaffold_659_4
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3547..4428)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003606079 rbh
NmrA-like family protein {ECO:0000313|EMBL:AJD46227.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
NmrA family protein rbh
SCNpilot_cont_500_bf_scaffold_659_5
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4510..5469
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035E119B rbh
LysR family transcriptional regulator protein {ECO:0000313|EMBL:AJD46228.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_659_6
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5420..8299)
DNA (2880bp) protein (960aa)
DSBA oxidoreductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003690551 rbh
DSBA oxidoreductase {ECO:0000313|EMBL:KJC33656.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
multidrug resistance protein EmrB-like protein; K03446 MFS transporter, DHA2 family, multidrug resistance protein B rbh
SCNpilot_cont_500_bf_scaffold_659_7
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8468..9154
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036C78E4
Uncharacterized protein {ECO:0000313|EMBL:KJC58450.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_659_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10508..11287
DNA (780bp) protein (260aa)
Transcriptional regulatory protein chvI n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4A7_9PROT
putative two-component response regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_659_9
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11266..11685)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ELU6_BRASB
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_500_bf_scaffold_659_10
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11778..12371)
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=1 Tax=Burkholderia graminis C4D1M RepID=B1G830_9BURK
TetR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_500_bf_scaffold_659_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12570..14969
DNA (2400bp) protein (800aa)
Competence protein ComEA helix-hairpin-helix repeat region n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQQ3_AFIFE rbh
Competence protein ComEA helix-hairpin-helix repeat region {ECO:0000313|EMBL:EKS30739.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
RNA-binding S1 domain-containing protein; K06959 uncharacterized protein
SCNpilot_cont_500_bf_scaffold_659_12
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15014..15931)
DNA (918bp) protein (306aa)
HlyD family secretion protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGT0_PHEZH
HlyD family secretion protein
HlyD family secretion protein {ECO:0000313|EMBL:ACG77296.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_500_bf_scaffold_659_13
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15928..16608)
DNA (681bp) protein (227aa)
ABC transporter, partial n=1 Tax=Dyella ginsengisoli RepID=UPI000373D3D2
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJK23751.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_659_14
Dickeya solani, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16605..17744)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=3 Tax=Serratia plymuthica RepID=S4YS66_SERPL
Uncharacterized protein {ECO:0000313|EMBL:KHN62553.1}; TaxID=1089444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya solani.;"
hypothetical protein; K02004 putative ABC transport system permease protein
SCNpilot_cont_500_bf_scaffold_659_15
unknown

Not on your lists

17974..18291
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_659_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18386..19147
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000372B914
putative dehydrogenase/reductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_659_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19195..20067)
DNA (873bp) protein (291aa)
shikimate dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25]
MycA5 n=1 Tax=Streptomyces flaveolus RepID=H9TEA6_9ACTO
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_659_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20151..20633)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TSY2_9PROT
peroxiredoxin
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_659_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20778..21377
DNA (600bp) protein (200aa)
UPF0301 protein P24_16462 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JVZ8_9PROT
transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_659_20
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21626..22765
DNA (1140bp) protein (380aa)
namA2; NADPH dehydrogenase NamA (EC:1.6.99.1); K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4]
NADPH dehydrogenase n=1 Tax=Curvibacter lanceolatus RepID=UPI00035EFB15 rbh
NADPH dehydrogenase {ECO:0000313|EMBL:AGW89002.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
SCNpilot_cont_500_bf_scaffold_659_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22838..26347)
DNA (3510bp) protein (1170aa)
indolepyruvate ferredoxin oxidoreductase; K04090 indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] rbh
Indolepyruvate ferredoxin oxidoreductase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GCH8_9BRAD rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_659_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26524..27357
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00037FF60D
UspA domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_659_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27604..28089)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00038183C5
tetratricopeptide TPR_2
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_659_24
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28150..29817)
DNA (1668bp) protein (556aa)
adenylate/guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1] rbh
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036A879C rbh
Adenylate/guanylate cyclase {ECO:0000313|EMBL:EKE70177.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_cont_500_bf_scaffold_659_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29825..30175)
DNA (351bp) protein (117aa)
arsC; arsenate reductase (EC:1.20.4.1); K00537 arsenate reductase [EC:1.20.4.1]
Arsenate reductase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TV42_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_659_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30239..30802)
DNA (564bp) protein (188aa)
Regulatory protein RecX n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AT53_AZOBR
putative regulator of DNA repair (RecX-like)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_659_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30823..31488)
DNA (666bp) protein (222aa)
Epoxide hydrolase domain-containing phosphatase (Fragment) n=1 Tax=uncultured microorganism RepID=F8UHX7_9ZZZZ
HAD family phosphatase; K07025 putative hydrolase of the HAD superfamily
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_659_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31608..32282
DNA (675bp) protein (225aa)
UPI0003D6BC30 related cluster n=1 Tax=unknown RepID=UPI0003D6BC30
TetR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_659_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32365..32796
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIT8_9BRAD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 66 in total

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