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SCNpilot_cont_500_bf_scaffold_919

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_919_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..515)
DNA (513bp) protein (171aa)
Amino acid permease-associated region n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UQ19_AKKM8
amino acid permease
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_2
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(617..1144)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000376DAA9
Dihydrofolate reductase {ECO:0000313|EMBL:EDP65961.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
cytochrome C biogenesis protein CcmH
SCNpilot_cont_500_bf_scaffold_919_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1161..2036)
DNA (876bp) protein (292aa)
Dienelactone hydrolase id=4969018 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
carboxymethylenebutenolidase, putative
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_4
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2033..2461)
DNA (429bp) protein (143aa)
UPI0003D60668 related cluster n=1 Tax=unknown RepID=UPI0003D60668
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:ETI65469.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
BadM/Rrf2 family transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
SCNpilot_cont_500_bf_scaffold_919_5
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2503..2967
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000366CE9D
Preprotein translocase subunit TatC {ECO:0000313|EMBL:KKC27207.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein; K06886 hemoglobin
SCNpilot_cont_500_bf_scaffold_919_6
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3002..3745
DNA (744bp) protein (248aa)
UPI0003D5A07C related cluster n=1 Tax=unknown RepID=UPI0003D5A07C rbh
Alternative oxidase 1 {ECO:0000313|EMBL:ETI64567.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
alternative oxidase rbh
SCNpilot_cont_500_bf_scaffold_919_7
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3747..4046
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Alphaproteobacteria RepID=UPI000262C618
Uncharacterized protein {ECO:0000313|EMBL:KHA63848.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_919_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4012..5778)
DNA (1767bp) protein (589aa)
Cation transporter protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HU21_9RHIZ rbh
Cation transporter protein {ECO:0000313|EMBL:EHK55781.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
cation transporter protein rbh
SCNpilot_cont_500_bf_scaffold_919_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6024..6407
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F607BC
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6490..6996
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00037388C4
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6993..7778
DNA (786bp) protein (262aa)
Putative transmembrane anti-sigma factor n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ESD3_METSB rbh
putative transmembrane anti-sigma factor rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8002..8268)
DNA (267bp) protein (89aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8287..9699)
DNA (1413bp) protein (471aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
dihydrolipoamide dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F76E18
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9710..10963)
DNA (1254bp) protein (418aa)
pyruvate/2-oxoglutarate dehydrogenase complex; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] rbh
Pyruvate/2-oxoglutarate dehydrogenase complex n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W059_MAGSA rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11003..13927)
DNA (2925bp) protein (975aa)
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2); K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] rbh
2-oxoglutarate dehydrogenase E1 component n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LVR2_9PROT rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13992..14867)
DNA (876bp) protein (292aa)
sucD1; succinyl-CoA synthetase subunit alpha; K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] rbh
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z848_AZOL4 rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14867..16063)
DNA (1197bp) protein (399aa)
succinyl-CoA synthetase; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3A5L4_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16383..17348)
DNA (966bp) protein (322aa)
mdh; malate dehydrogenase (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] rbh
Malate dehydrogenase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=MDH_RHOCS rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17457..18320)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0JZK2_9SPHN
alpha/beta hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18325..19218)
DNA (894bp) protein (298aa)
carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
carboxymethylenebutenolidase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00036A0060
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19290..20465)
DNA (1176bp) protein (392aa)
Putative ATPase, AFG1 family protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J5K4_9PROT rbh
putative ATPase, AFG1 family; K06916
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20516..21466
DNA (951bp) protein (317aa)
fmt; methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9]
Methionyl-tRNA formyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JZN8_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21471..22274
DNA (804bp) protein (268aa)
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
tRNA pseudouridine synthase A n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9Q7_AZOL4
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22224..22808)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B37D91
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22830..24017)
DNA (1188bp) protein (396aa)
succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
succinyl-diaminopimelate desuccinylase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B4CC02
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24122..27778)
DNA (3657bp) protein (1219aa)
Chromosome partition protein Smc n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IR58_RHOCS rbh
smc; SMC family protein; K03529 chromosome segregation protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27801..28460)
DNA (660bp) protein (220aa)
DsbA oxidoreductase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TPA6_TISMK
DsbA oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28515..29585)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00037BF6C7
DSBA oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29638..30690
DNA (1053bp) protein (351aa)
mutY; A/G-specific adenine glycosylase; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] rbh
A/G-specific adenine glycosylase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JWV5_9PROT rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_919_30
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30742..31818)
DNA (1077bp) protein (359aa)
tartrate dehydrogenase; K07246 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] rbh
Tartrate dehydrogenase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PQL5_9BRAD rbh
Tartrate dehydrogenase {ECO:0000313|EMBL:EKS41810.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Displaying items 1-30 of 36 in total

View Taxonomy