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SCNpilot_cont_500_bf_scaffold_11489

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_11489_1
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..290)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4P147_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ81861.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
hypothetical protein; K09965 hypothetical protein
SCNpilot_cont_500_bf_scaffold_11489_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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355..693
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037C2EA1
Uncharacterized protein {ECO:0000313|EMBL:KIZ40005.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_11489_3
bacterium YEK0313, Bacteria

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comp(724..1197)
DNA (474bp) protein (158aa)
Putative nickel-responsive regulator n=1 Tax=Rhodovulum sp. PH10 RepID=J6UJE0_9RHOB
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
CopG family transcriptional regulator; K07722 CopG family transcriptional regulator, nickel-responsive regulator
SCNpilot_cont_500_bf_scaffold_11489_4
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1228..3354
DNA (2127bp) protein (709aa)
Peptide/nickel transport system substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H3V9_9BRAD
Peptide/nickel transport system substrate-binding protein {ECO:0000313|EMBL:ERF84472.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
TonB-dependent receptor plug
SCNpilot_cont_500_bf_scaffold_11489_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3415..3618
DNA (204bp) protein (68aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_11489_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3620..4114
DNA (495bp) protein (165aa)
Uncharacterized protein n=2 Tax=Rhodopseudomonas palustris RepID=B3Q8H4_RHOPT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_11489_7
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4005..4715)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000363262B
Transcriptional regulator {ECO:0000313|EMBL:KFG70899.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
Crp/FNR family transcriptional regulator; K15861 CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
SCNpilot_cont_500_bf_scaffold_11489_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4812..5417)
DNA (606bp) protein (202aa)
Two-component, nitrogen fixation regulatory protein fixJ n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YIV4_MOBAS
fixJ; transcriptional regulator fixJ; K14987 two-component system, LuxR family, response regulator FixJ
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_11489_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5407..5877)
DNA (471bp) protein (157aa)
hypothetical protein (EC:2.7.13.3); K14986 two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B1P1_METEA
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 9 items

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