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SCNpilot_cont_500_bf_scaffold_1132

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1132_1
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..698)
DNA (696bp) protein (232aa)
Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IJ97_AZOC5
lysR; transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAF86269.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_1132_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

756..2144
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Halomonas sp. BJGMM-B45 RepID=UPI0003AEB430
Uncharacterized protein {ECO:0000313|EMBL:EYF06973.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
norM; MATE efflux family protein
SCNpilot_cont_500_bf_scaffold_1132_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2122..3636)
DNA (1515bp) protein (505aa)
3-hydroxy-acyl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
3-hydroxy-acyl-CoA dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JXN1_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1132_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3707..5626)
DNA (1920bp) protein (640aa)
Propionyl-CoA synthetase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKB1_AZOBR rbh
prpE; propionyl-CoA synthetase rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1132_5
unknown

Not on your lists

5731..6267
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1132_6
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6327..7292
DNA (966bp) protein (322aa)
Uncharacterized protein UPF0065 n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WNK6_VEREI
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABM59213.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_500_bf_scaffold_1132_7
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7344..8309
DNA (966bp) protein (322aa)
Uncharacterized protein UPF0065 n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WNK6_VEREI
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABM59213.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_500_bf_scaffold_1132_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8321..9037)
DNA (717bp) protein (239aa)
Ion channel n=1 Tax=Pseudomonas sp. GM60 RepID=J2U0U6_9PSED
Voltage-gated potassium channel
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1132_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9194..11089
DNA (1896bp) protein (632aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II (EC:2.3.1.86); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZTU8_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1132_10
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11110..14013)
DNA (2904bp) protein (968aa)
Putative protease n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I456_AZOC5
protease
Putative protease {ECO:0000313|EMBL:BAF87690.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_1132_11
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14211..17114)
DNA (2904bp) protein (968aa)
Putative protease n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I456_AZOC5
protease
Putative protease {ECO:0000313|EMBL:BAF87690.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_1132_12
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17277..20195)
DNA (2919bp) protein (973aa)
Putative protease n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I456_AZOC5
protease
Putative protease {ECO:0000313|EMBL:BAF87690.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_1132_13
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20333..21862)
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DIX7_BRAJP rbh
AMP-dependent acyl-CoA synthetase {ECO:0000313|EMBL:KGT77923.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1132_14
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21871..22992)
DNA (1122bp) protein (374aa)
saccharopine dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002EB935D rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP06746.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1132_15
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23044..23847)
DNA (804bp) protein (268aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
oxidoreductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E1A52D rbh
Gluconate 2-dehydrogenase {ECO:0000313|EMBL:ERF84501.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_500_bf_scaffold_1132_16
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23990..24619
DNA (630bp) protein (210aa)
TetR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI000318ADFE
Uncharacterized protein {ECO:0000313|EMBL:EKS38938.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1132_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24763..25455
DNA (693bp) protein (231aa)
Uncharacterized protein n=3 Tax=Azotobacter vinelandii RepID=M9Y4J8_AZOVI
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 17 items

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