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SCNpilot_cont_500_bf_scaffold_1192

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1192_1
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39..1373)
DNA (1335bp) protein (445aa)
Putative membrane protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFY3_METPP
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ABM94472.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
SCNpilot_cont_500_bf_scaffold_1192_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1382..2146)
DNA (765bp) protein (255aa)
idnO; gluconate 5-dehydrogenase (EC:1.1.1.69); K00046 gluconate 5-dehydrogenase [EC:1.1.1.69]
UPI0003D63D43 related cluster n=1 Tax=unknown RepID=UPI0003D63D43
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1192_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2208..2900
DNA (693bp) protein (231aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI0003761A62
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1192_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3054..4370
DNA (1317bp) protein (439aa)
glycerol-3-phosphate ABC transporter substrate-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000360226B
sugar ABC transporter periplasmic protein; K05813 sn-glycerol 3-phosphate transport system substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1192_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4490..5392
DNA (903bp) protein (301aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2UA79_RALPJ rbh
binding-protein-dependent transport system inner membrane protein; K05814 sn-glycerol 3-phosphate transport system permease protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1192_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5392..6240
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036E6ADA rbh
ugpE; sn-glycerol-3-phosphate ABC transporter permease; K05815 sn-glycerol 3-phosphate transport system permease protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1192_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6244..7335
DNA (1092bp) protein (364aa)
sugar ABC transporter ATP-binding protein; K05816 sn-glycerol 3-phosphate transport system ATP-binding protein [EC:3.6.3.20] rbh
Glycerol-3-phosphate transporter ATP-binding subunit n=1 Tax=Oceanibaculum indicum P24 RepID=K2J8G5_9PROT rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1192_8
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7332..8126
DNA (795bp) protein (265aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EMD9_METSB rbh
fumarylacetoacetate (FAA) hydrolase rbh
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:ACK52067.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_500_bf_scaffold_1192_9
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8178..8879
DNA (702bp) protein (234aa)
can; carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1216980 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas salmonicida subsp. masoucida NBRC 13784.;"
Carbonic anhydrase n=3 Tax=Aeromonas salmonicida RepID=A4SSN7_AERS4
SCNpilot_cont_500_bf_scaffold_1192_10
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8879..9673
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A6B5FE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS14417.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_500_bf_scaffold_1192_11
unknown

Not on your lists

comp(9616..9774)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1192_12
Dickeya chrysanthemi, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9945..10796
DNA (852bp) protein (284aa)
UPI00039D28F2 related cluster n=1 Tax=unknown RepID=UPI00039D28F2
Hydrolase {ECO:0000313|EMBL:KGT98822.1}; TaxID=556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya chrysanthemi (Pectobacterium chrysanthemi) (Erwinia; chrysanthemi).;"
endonuclease/exonuclease/phosphatase; K06896
SCNpilot_cont_500_bf_scaffold_1192_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(10845..11498)
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021M2_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84365.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_cont_500_bf_scaffold_1192_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11482..12462)
DNA (981bp) protein (327aa)
Bll5075 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89K43_BRADU rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC66582.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1192_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12478..13479)
DNA (1002bp) protein (334aa)
NapD-like protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IX19_METNO rbh
NapD-like protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1192_16
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13546..14628
DNA (1083bp) protein (361aa)
cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47]
cysteine synthase n=1 Tax=Kiloniella laminariae RepID=UPI0003773CB6 rbh
Cysteine synthase {ECO:0000313|EMBL:KFG69431.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
SCNpilot_cont_500_bf_scaffold_1192_17
unknown

Not on your lists

14875..15225
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1192_18
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15274..16215)
DNA (942bp) protein (314aa)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A2F8_STAND rbh
alpha/beta hydrolase rbh
Alpha/beta hydrolase fold-3 domain protein {ECO:0000313|EMBL:ADH89621.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_1192_19
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16337..17257)
DNA (921bp) protein (307aa)
Transcriptional regulator, LysR family id=2984543 bin=GWF1_Rhodobacteraceae_65_7 species=Paracoccus denitrificans genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
LysR family transcriptional regulator
Tax=GWF1_Rhodobacteraceae_65_7_curated
SCNpilot_cont_500_bf_scaffold_1192_20
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17402..18910
DNA (1509bp) protein (503aa)
sulfatase family protein 12 (EC:3.1.6.-)
Sulfatase family protein 12 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HLK0_ACHXA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
SCNpilot_cont_500_bf_scaffold_1192_21
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18913..19899
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00037857C1
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCNpilot_cont_500_bf_scaffold_1192_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19948..20589)
DNA (642bp) protein (214aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I0B7_RHOVT
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1192_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20621..22777)
DNA (2157bp) protein (719aa)
Thiol:disulfide interchange protein DsbD, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRI6_RHOCS rbh
dsbD; thiol:disulfide interchange protein DsbD rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1192_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22910..24133
DNA (1224bp) protein (408aa)
amaB; N-carbamoyl-L-amino acid hydrolase AmaB (EC:3.5.1.87); K06016 N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.87] rbh
Beta-ureidopropionase n=1 Tax=Rhodovulum sp. PH10 RepID=J6J2F0_9RHOB rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1192_25
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24113..24466)
DNA (354bp) protein (118aa)
TRAP dicarboxylate transporter n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U5H2_ALCXX
TRAP-type C4-dicarboxylate transport system,large permease component
Neu5Ac permease {ECO:0000313|EMBL:CKI14864.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
Displaying 25 items

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