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SCNpilot_cont_500_bf_scaffold_1199

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1199_1
unknown

Not on your lists

comp(3..98)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1199_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107..460)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXK4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32165.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1199_3
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(411..3578)
DNA (3168bp) protein (1056aa)
Cation efflux system protein CzcA n=2 Tax=Oligotropha carboxidovorans RepID=B6JK90_OLICO
Cation efflux system protein CzcA {ECO:0000313|EMBL:AEI08276.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
czcA1; cation efflux system protein CzcA; K15726 cobalt-zinc-cadmium resistance protein CzcA
SCNpilot_cont_500_bf_scaffold_1199_4
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3603..4595)
DNA (993bp) protein (331aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ICX7_XANP2 rbh
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABS65870.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_1199_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4592..5881)
DNA (1290bp) protein (430aa)
Outer membrane efflux protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK93_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig141, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53518.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
czcC1; outer membrane efflux protein, putative cobalt-zinc-cadmium resistance protein CzcC; K15725 cobalt-zinc-cadmium resistance protein CzcC
SCNpilot_cont_500_bf_scaffold_1199_6
unknown

Not on your lists

comp(5948..6340)
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1199_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6448..7320)
DNA (873bp) protein (291aa)
Galactose mutarotase-like enzyme n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLW0_9RHIZ rbh
aldose 1-epimerase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1199_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7406..8434)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI00036CD985 rbh
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1199_9
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8468..10171)
DNA (1704bp) protein (568aa)
Putative sulfate transporter with a STAS domain (C-terminal) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RPM8_9BRAD
Putative sulfate transporter with a STAS domain (C-terminal) {ECO:0000313|EMBL:CCD83905.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
sulfate transporter; K03321 sulfate permease, SulP family
SCNpilot_cont_500_bf_scaffold_1199_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10354..11349
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037BD24F rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1199_11
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11426..11941
DNA (516bp) protein (172aa)
C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036D9B25
Uncharacterized protein {ECO:0000313|EMBL:EJZ32670.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1199_12
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11938..13218
DNA (1281bp) protein (427aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003826E56 rbh
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EIG57684.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1199_13
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13252..13803)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A276_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE95166.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_cont_500_bf_scaffold_1199_14
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14006..14941)
DNA (936bp) protein (312aa)
2-nitropropane dioxygenase; K02371 enoyl-[acyl carrier protein] reductase II [EC:1.3.1.-] rbh
2-nitropropane dioxygenase NPD n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQM0_PARL1 rbh
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:ABS62203.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_500_bf_scaffold_1199_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14974..16536)
DNA (1563bp) protein (521aa)
TAP domain protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGC6_AZOBR
TAP domain protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1199_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16625..17878
DNA (1254bp) protein (418aa)
Major facilitator superfamily MFS_1 n=2 Tax=Thauera RepID=C4ZJI2_THASP
major facilitator superfamily protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1199_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17881..18012
DNA (132bp) protein (44aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1199_18
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18088..22056
DNA (3969bp) protein (1323aa)
Uncharacterized protein n=1 Tax=Bacillus cereus BAG1O-3 RepID=S3IBM2_BACCE rbh
Uncharacterized protein {ECO:0000313|EMBL:EPF11113.1}; TaxID=1053169 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG1O-3.;"
SCNpilot_cont_500_bf_scaffold_1199_19
unknown

Not on your lists

22061..23059
DNA (999bp) protein (333aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1199_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23192..24502)
DNA (1311bp) protein (437aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=HSLU_RHOCS rbh
hslU; heat shock protein HslVU, ATPase subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1199_21
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24509..25072)
DNA (564bp) protein (188aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
ATP-dependent protease subunit HslV n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FTG5_PHAMO
SCNpilot_cont_500_bf_scaffold_1199_22
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25206..26462
DNA (1257bp) protein (419aa)
D-amino-acid dehydrogenase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI00034AD87F
Amino acid dehydrogenase {ECO:0000313|EMBL:EZQ12606.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCNpilot_cont_500_bf_scaffold_1199_23
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26473..26865
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002DC830A
Flagellar motor switch protein FliN/FliY {ECO:0000313|EMBL:ERF82895.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1199_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27127..27870)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRL9_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61128.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_1199_25
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27887..28282
DNA (396bp) protein (132aa)
carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
4-carboxymuconolactone decarboxylase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B702_PARDP
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCNpilot_cont_500_bf_scaffold_1199_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28284..29468
DNA (1185bp) protein (395aa)
Probable class-V aminotransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8X4_SORC5 rbh
class-V aminotransferase rbh
Probable class-V aminotransferase {ECO:0000313|EMBL:CAN99083.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_cont_500_bf_scaffold_1199_27
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29574..30347
DNA (774bp) protein (258aa)
methylase n=1 Tax=Xanthomonas sacchari RepID=UPI000262B1B0 rbh
Methyltransferase type 11 {ECO:0000313|EMBL:KGP01891.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1199_28
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30467..32050
DNA (1584bp) protein (528aa)
Tat pathway signal sequence domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A430_9PROT rbh
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EHL98425.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_1199_29
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32062..33129
DNA (1068bp) protein (356aa)
adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4]
Adenosine deaminase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A429_9PROT rbh
Adenosine deaminase {ECO:0000313|EMBL:EHL98424.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_cont_500_bf_scaffold_1199_30
Synechococcus sp. PCC 7002, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(33238..33900)
DNA (663bp) protein (221aa)
msrA; methionine sulfoxide reductase A; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] rbh
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=32049 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum; quadruplicatum).;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) RepID=B1XM81_SYNP2 rbh
Displaying items 1-30 of 35 in total

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