name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_1241_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..1034
|
hypothetical protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI000374333E
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_2
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1283..2029)
|
Putative glycerophosphoryl diester phosphodiesterase n=1 Tax=Variovorax paradoxus B4 RepID=T1XE75_VARPD
Uncharacterized protein {ECO:0000313|EMBL:BAR60939.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
putative glycerophosphoryl diester phosphodiesterase
|
|
SCNpilot_cont_500_bf_scaffold_1241_3
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2049..2969)
|
glycerol-3-phosphate transporter membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI00036A3946
rbh
Putative binding protein-protein-dependent transport system inner membrane component protein {ECO:0000313|EMBL:KGJ69254.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
binding-protein-dependent transport systems inner membrane component; K05815 sn-glycerol 3-phosphate transport system permease protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1241_4
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2985..3986)
|
Permease component of ABC-type sugar transporter n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXW1_9RHIZ
rbh
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:EIM28803.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
sn-glycerol-3-phosphate ABC transporter permease; K05814 sn-glycerol 3-phosphate transport system permease protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1241_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3970..5298)
|
Extracellular solute-binding protein family 1 n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CVW2_VARPS
rbh
Variovorax paradoxus strain MEDvA23 contig_63, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26005.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
ABC transporter periplasmic protein; K05813 sn-glycerol 3-phosphate transport system substrate-binding protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1241_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5314..6576)
|
Putative glycerol-1-phosphate dehydrogenase n=1 Tax=Variovorax paradoxus B4 RepID=T1XFE1_VARPD
rbh
putative glycerol-1-phosphate dehydrogenase
rbh
Putative glycerol-1-phosphate dehydrogenase {ECO:0000313|EMBL:AGU51231.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_cont_500_bf_scaffold_1241_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6619..7575
|
Putative transcriptional regulator, DeoR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XE80_VARPD
rbh
DeoR family transcriptional regulator
rbh
Putative transcriptional regulator, DeoR family {ECO:0000313|EMBL:AGU51232.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_cont_500_bf_scaffold_1241_8
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7580..9031
|
xylulokinase; K00854 xylulokinase [EC:2.7.1.17]
Xylulokinase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6S9_LEPCP
Uncharacterized protein {ECO:0000313|EMBL:AHY52657.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
|
|
SCNpilot_cont_500_bf_scaffold_1241_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9028..9684)
|
glutathione S-transferase domain-containing protein; K04097 glutathione S-transferase [EC:2.5.1.18]
rbh
Glutathione S-transferase domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZE9_STAND
rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9766..10956
|
Polyhydroxyalkanoate depolymerase, intracellular n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZE8_STAND
rbh
polyhydroxyalkanoate depolymerase
rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10996..13071
|
Methylmalonyl-CoA mutase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y0M6_9PROT
mutB1; adenosylcobalamin-dependent methylmalonyl-CoA mutase large subunit (MCM-alpha)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13124..13999)
|
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14105..15973
|
ATP-binding cassette subfamily B n=1 Tax=Oceanibaculum indicum P24 RepID=K2JZ19_9PROT
ABC transporter; fused ATPase and permease components
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15960..17126
|
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TVW3_9PROT
major facilitator transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17142..18140
|
argK; arginine/ornithine transport system ATPase (EC:2.7.-.-); K07588 LAO/AO transport system kinase [EC:2.7.-.-]
Lao n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IVY8_RHOCS
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18130..18615
|
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00035D5DB9
hypothetical protein; K09160 hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18689..18994
|
50S ribosomal protein L28 n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUB1_9PROT
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19083..20099)
|
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMX7_RHOCS
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20117..22066)
|
Cobalt chelatase large subunit n=1 Tax=Oceanibaculum indicum P24 RepID=K2KHY6_9PROT
rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22135..23139)
|
Cobaltochelatase, CobS subunit n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IVW9_RHOCS
rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23252..23833)
|
Uncharacterized protein n=2 Tax=Acidiphilium RepID=F0IZ94_ACIMA
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23881..24171
|
BolA family protein n=1 Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RM67_ASTEC
bola family protein; K05527 BolA protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24242..24931)
|
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AI46_AZOBR
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24970..26277)
|
Mg2+ and Co2+ transporter CorB n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U0Y4_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26288..27415)
|
3-dehydroquinate synthase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KHZ3_9PROT
rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27412..28020)
|
aroK; shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K217_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28433..30043
|
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TKA0_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30040..31041
|
Tyrosine recombinase XerC n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z2Y3_9PROT
rbh
site-specific recombinase XerD; K04763 integrase/recombinase XerD
rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31076..32029
|
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]
rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=ACCA_RHOCS
rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_1241_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32035..33051
|
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0003145D13
rbh
hypothetical protein
rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|