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SCNpilot_cont_500_bf_scaffold_1500

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1500_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..147)
DNA (147bp) protein (49aa)
bdxB; benzoyl-CoA oxygenase component B (EC:1.14.13.58)
Benzoyl-CoA oxygenase component B n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0KBS7_CUPNH
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1500_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(216..1880)
DNA (1665bp) protein (555aa)
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17); K15513 benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] id=14627885 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10 rbh
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17); K15513 benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1500_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1909..2337
DNA (429bp) protein (143aa)
Acetyltransferases n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SKE2_RHOPH
Acetyltransferases
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1500_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2334..2729
DNA (396bp) protein (132aa)
Rrf2-like transcriptional regulator protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U468_9PROT
transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1500_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2743..3456
DNA (714bp) protein (238aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1500_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3692..4885)
DNA (1194bp) protein (398aa)
acyl-CoA dehydrogenase (EC:1.3.-.-)
acyl-CoA dehydrogenase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B42F90
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1500_7
bacterium YEK0313, Bacteria

Not on your lists

comp(4912..5514)
DNA (603bp) protein (201aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
4-carboxymuconolactone decarboxylase n=1 Tax=Nitratireductor indicus C115 RepID=K2NZ62_9RHIZ
peroxidase-related enzyme rbh
SCNpilot_cont_500_bf_scaffold_1500_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5533..7104)
DNA (1572bp) protein (524aa)
hypothetical protein n=1 Tax=Thalassospira lucentensis RepID=UPI0003B3F4A0
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1500_9
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7101..8603)
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Thalassospira lucentensis RepID=UPI0003B3F4A0
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCNpilot_cont_500_bf_scaffold_1500_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8675..9766)
DNA (1092bp) protein (364aa)
Transglutaminase domain protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JC73_OLICO
transglutaminase domain protein
Transglutaminase-like protein, TAT translocated {ECO:0000313|EMBL:AEI07504.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_1500_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10041..10757)
DNA (717bp) protein (239aa)
ABC-type branched-chain amino acid transport system, ATPase component protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AES1_9PROT rbh
putative branched-chain amino acid ABC transporter, ATP-binding component (livF-like)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_cont_500_bf_scaffold_1500_12
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10754..11491)
DNA (738bp) protein (246aa)
Putative branched-chain amino acid ABC transporter, ATP-binding component (LivG-like) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZAN7_AZOL4
putative branched-chain amino acid ABC transporter, ATP-binding component (livG-like); K01995 branched-chain amino acid transport system ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCNpilot_cont_500_bf_scaffold_1500_13
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11488..12486)
DNA (999bp) protein (333aa)
Putative branched-chain amino acid ABC transporter, permease component (LivM-like) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZAN6_AZOL4
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:EWY39758.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative branched-chain amino acid ABC transporter, permease component (livM-like); K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_1500_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12483..13364)
DNA (882bp) protein (294aa)
Branched-chain amino acid ABC-type transport system n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W5P2_MAGSA
branched chain amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1500_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13479..14747)
DNA (1269bp) protein (423aa)
ABC-type branched-chain amino acid transport systems n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W5P1_MAGSA rbh
ABC-type branched-chain amino acid transport systems; K01999 branched-chain amino acid transport system substrate-binding protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1500_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14850..15731
DNA (882bp) protein (294aa)
5-hydroxyisourate hydrolase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIZ1_9PROT rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1500_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15749..17185
DNA (1437bp) protein (479aa)
hypothetical protein; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JM76_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1500_18
unknown

Not on your lists

comp(17170..17283)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1500_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17316..19151
DNA (1836bp) protein (612aa)
Peptidase S15 n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TQH8_9BRAD rbh
peptidase S15; K06978 rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1500_20
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19317..20417
DNA (1101bp) protein (367aa)
Putative exported protein n=3 Tax=Bordetella bronchiseptica RepID=K0MSM0_BORBM
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR76300.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1500_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20534..21157
DNA (624bp) protein (208aa)
TRAP transporter, DctQ-like membrane protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R2I3_9RHOB
dctQ; TRAP dicarboxylate transporter subunit DctQ
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1500_22
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21154..22458
DNA (1305bp) protein (435aa)
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Oceanibaculum indicum P24 RepID=K2JNW1_9PROT rbh
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:EKE76978.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
TRAP dicarboxylate transporter subunit DctM rbh
Displaying 22 items

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