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SCNpilot_cont_500_bf_scaffold_1819

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1819_1
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168..1385)
DNA (1218bp) protein (406aa)
LuxA-like protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89EN9_BRADU rbh
Luciferase {ECO:0000313|EMBL:ETR78680.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
LuxA-like protein rbh
SCNpilot_cont_500_bf_scaffold_1819_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1565..2830
DNA (1266bp) protein (422aa)
Acyl-CoA dehydrogenase n=1 Tax=Alcanivorax sp. PN-3 RepID=U7I288_9GAMM rbh
acyl-CoA dehydrogenase family protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1819_3
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2880..3524)
DNA (645bp) protein (215aa)
UPI0003CE1A44 related cluster n=1 Tax=unknown RepID=UPI0003CE1A44
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESW89776.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCNpilot_cont_500_bf_scaffold_1819_4
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3631..4284)
DNA (654bp) protein (218aa)
UPI0003CE1A44 related cluster n=1 Tax=unknown RepID=UPI0003CE1A44 rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
SCNpilot_cont_500_bf_scaffold_1819_5
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4360..5580)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5X7_SORCE rbh
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG20758.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1819_6
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6164..6379
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000374F9CC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN84813.1}; TaxID=320373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 668).;"
SCNpilot_cont_500_bf_scaffold_1819_7
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6393..7205
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S465_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EHP42704.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1819_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7246..7659
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CKH2_9BURK
Variovorax paradoxus strain MEDvA23 contig_49, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28206.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
glutathione-dependent formaldehyde-activating protein
SCNpilot_cont_500_bf_scaffold_1819_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7749..8159
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A486_STAND
Uncharacterized protein {ECO:0000313|EMBL:KFC75960.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1819_10
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8174..8644
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A0D2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHM01066.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1819_11
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8655..8945)
DNA (291bp) protein (97aa)
Antibiotic biosynthesis monooxygenase n=2 Tax=Rhodospirillum rubrum RepID=G2T878_RHORU
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ABC21194.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
SCNpilot_cont_500_bf_scaffold_1819_12
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9027..9539
DNA (513bp) protein (171aa)
Shikimate kinase n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VKJ2_9RHIZ
Shikimate kinase {ECO:0000313|EMBL:EJN06567.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
shikimate kinase
SCNpilot_cont_500_bf_scaffold_1819_13
bacterium YEK0313, Bacteria

Not on your lists

comp(9536..11413)
DNA (1878bp) protein (626aa)
TRAP transporter, DctM subunit n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VCG0_9RHIZ
Sialic acid TRAP transporter permease protein SiaT {ECO:0000313|EMBL:CEJ11604.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative TRAP-type C4-dicarboxylate transport system, fusion of small and large permease proteins DctQ/DctM domains
SCNpilot_cont_500_bf_scaffold_1819_14
bacterium YEK0313, Bacteria

Not on your lists

comp(11419..12432)
DNA (1014bp) protein (338aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HRH7_9RHIZ rbh
Sialic acid-binding periplasmic protein SiaP {ECO:0000313|EMBL:CEJ11605.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
TRAP dicarboxylate transporter subunit DctP
SCNpilot_cont_500_bf_scaffold_1819_15
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12611..13363)
DNA (753bp) protein (251aa)
Glutamine amidotransferase class-I n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B351_RHILS
Glutamine amidotransferase protein {ECO:0000313|EMBL:AJC77525.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
glutamine amidotransferase
SCNpilot_cont_500_bf_scaffold_1819_16
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13503..14270)
DNA (768bp) protein (256aa)
aphE; streptomycin 3''-kinase (EC:2.7.1.87); K10673 streptomycin 3"-kinase [EC:2.7.1.87]
StrA n=6 Tax=Acinetobacter baumannii RepID=Q2FD35_ACIBA
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AKA33619.1}; StrA {ECO:0000313|EMBL:ADU56649.1}; Streptomycin phosphotransferase A {ECO:0000313|EMBL:CAJ77025.1}; TaxID=470 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter baumannii.;"
SCNpilot_cont_500_bf_scaffold_1819_17
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15192..16535)
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262AE1D rbh
Uncharacterized protein {ECO:0000313|EMBL:AJC44889.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1819_18
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16532..17146)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI000379D611
Uncharacterized protein {ECO:0000313|EMBL:AJC44890.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCNpilot_cont_500_bf_scaffold_1819_19
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17133..17705)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262AE1B
Uncharacterized protein {ECO:0000313|EMBL:AJC44891.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1819_20
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17702..18313)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037B6B91
Uncharacterized protein {ECO:0000313|EMBL:AJC44892.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1819_21
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18814..19413
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MDN2_RHISN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACP25551.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCNpilot_cont_500_bf_scaffold_1819_22
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19429..19911)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJ69_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE06507.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1819_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19960..20859)
DNA (900bp) protein (300aa)
ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI000378C970 rbh
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:KFC70970.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transporter; K15269 probable blue pigment (indigoidine) exporter
SCNpilot_cont_500_bf_scaffold_1819_24
bacterium YEK0313, Bacteria

Not on your lists

20945..21433
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003624188
HTH-type transcriptional regulator MhqR {ECO:0000313|EMBL:CEJ12550.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transcriptional regulator protein
SCNpilot_cont_500_bf_scaffold_1819_25
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21387..22229)
DNA (843bp) protein (281aa)
dienelactone hydrolase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030BB2C3 rbh
Dienelactone hydrolase {ECO:0000313|EMBL:KJC42360.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1819_26
bacterium YEK0313, Bacteria

Not on your lists

22257..23228
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036FEA03 rbh
HTH-type transcriptional regulator CdhR {ECO:0000313|EMBL:CEJ11618.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
AraC family transcription regulator
SCNpilot_cont_500_bf_scaffold_1819_27
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23239..24051)
DNA (813bp) protein (271aa)
UPI0003CE35D8 related cluster n=1 Tax=unknown RepID=UPI0003CE35D8 rbh
SAM-dependent methyltransferase PhcB {ECO:0000313|EMBL:ESY81171.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
type 11 methyltransferase rbh
SCNpilot_cont_500_bf_scaffold_1819_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24201..25025)
DNA (825bp) protein (275aa)
alpha/beta hydrolase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034738B0
Alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:ABD05918.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_500_bf_scaffold_1819_29
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25114..26118
DNA (1005bp) protein (335aa)
Glycerophosphoryl diester phosphodiesterase protein {ECO:0000313|EMBL:AJC78429.1}; EC=3.1.4.46 {ECO:0000313|EMBL:AJC78429.1};; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
glycerophosphoryl diester phosphodiesterase family protein; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] rbh
glycerophosphoryl diester phosphodiesterase n=1 Tax=Rhizobium leguminosarum RepID=UPI000375749C rbh
SCNpilot_cont_500_bf_scaffold_1819_30
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26132..26602)
DNA (471bp) protein (157aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3N9_9RHIZ
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:EHK52416.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
activator of Hsp90 ATPase 1 family protein
Displaying items 1-30 of 38 in total

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