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SCNpilot_cont_500_bf_scaffold_1976

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1976_1
unknown

Not on your lists

comp(3..86)
DNA (84bp) protein (28aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1976_2
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164..1066)
DNA (903bp) protein (301aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035EC445
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KGB53965.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
LysR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1976_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1183..2073
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2X1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35084.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein; K06911 rbh
SCNpilot_cont_500_bf_scaffold_1976_4
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2070..2708
DNA (639bp) protein (213aa)
amidase n=1 Tax=Dyella japonica RepID=UPI0002F67152 rbh
Amidase {ECO:0000313|EMBL:AIF48286.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
isochorismatase hydrolase rbh
SCNpilot_cont_500_bf_scaffold_1976_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2957..4162
DNA (1206bp) protein (402aa)
dapC; N-succinyldiaminopimelate aminotransferase (EC:2.6.1.17) rbh
N-succinyldiaminopimelate aminotransferase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P5H0_AZOS1 rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1976_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4178..7078
DNA (2901bp) protein (967aa)
FtsK/SpoIIIE family, putative n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B6Z3_9RHOB rbh
ftsK; DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1976_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7117..8841
DNA (1725bp) protein (575aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00037022BD
paraquat-inducible protein B; K06192 paraquat-inducible protein B
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1976_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8841..9401
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVR3_GRABC
hypothetical protein; K09857 hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1976_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9427..10803
DNA (1377bp) protein (459aa)
Paraquat-inducible protein A n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVR5_GRABC rbh
paraquat-inducible protein A; K03808 paraquat-inducible protein A rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1976_10
unknown

Not on your lists

comp(10772..11491)
DNA (720bp) protein (240aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1976_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11604..12485
DNA (882bp) protein (294aa)
Cyclic imide hydrolase n=1 Tax=Pseudomonas putida RepID=Q4JG22_PSEPU
polysaccharide deacetylase family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1976_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12488..12823
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1K9_9RHIZ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1976_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12816..13811
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037F5DAA
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1976_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

13921..14913
DNA (993bp) protein (331aa)
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J0U4_9PROT
bacterial periplasmic substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SCNpilot_cont_500_bf_scaffold_1976_15
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14910..15761
DNA (852bp) protein (284aa)
ABC transporter n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IA69_AZOC5
ABC transporter
ABC transporter {ECO:0000313|EMBL:BAF88469.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_1976_16
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15758..16531
DNA (774bp) protein (258aa)
ABC transporter n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXP8_AZOBR
ABC transporter
Nitrate ABC transporter permease {ECO:0000313|EMBL:AIB15862.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCNpilot_cont_500_bf_scaffold_1976_17
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16542..17309
DNA (768bp) protein (256aa)
ABC transporter n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXP7_AZOBR
Nitrate ABC transporter permease {ECO:0000313|EMBL:AIB15861.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
ABC transporter
SCNpilot_cont_500_bf_scaffold_1976_18
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17306..18100
DNA (795bp) protein (265aa)
Putative Transcriptional regulator, GntR family protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SNE4_9BRAD
Putative Transcriptional regulator, GntR family protein {ECO:0000313|EMBL:CCD95721.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1976_19
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18112..18981
DNA (870bp) protein (290aa)
Candidate carboxyvinyl-carboxyphosphonate phosphorylmutase (Carboxyphosphonoenolpyruvate phosphonomutase) n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZ93_RAMTT
PrpB protein {ECO:0000313|EMBL:BAQ50063.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
carboxyvinyl-carboxyphosphonate phosphorylmutase
SCNpilot_cont_500_bf_scaffold_1976_20
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18994..20397
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
3-isopropylmalate dehydratase, large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] rbh
3-isopropylmalate dehydratase large subunit id=2937753 bin=GWC2_Methylomirabilis_70_16 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
SCNpilot_cont_500_bf_scaffold_1976_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

20407..21009
DNA (603bp) protein (201aa)
leuD; alpha-IPM isomerase; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase small subunit id=2642972 bin=GWF2_Methylomirabilis_70_14 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
SCNpilot_cont_500_bf_scaffold_1976_22
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21041..21484)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Arthrobacter sp. TB 23 RepID=UPI000367A377
Uncharacterized protein {ECO:0000313|EMBL:AIB14055.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1976_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21549..22202)
DNA (654bp) protein (218aa)
hisH; amidotransferase; K02501 glutamine amidotransferase [EC:2.4.2.-]
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NYP0_AZOS1
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1976_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22215..22901)
DNA (687bp) protein (229aa)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JV32_9PROT rbh
hisB; imidazoleglycerol-phosphate dehydratase rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1976_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22929..23834)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMG1_TISMK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_1976_26
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23958..25229)
DNA (1272bp) protein (424aa)
Acyl-CoA dehydrogenase n=1 Tax=Williamsia sp. D3 RepID=V8D2V3_9ACTO
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KEI45590.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
fadE12_3 rbh
SCNpilot_cont_500_bf_scaffold_1976_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25322..25693)
DNA (372bp) protein (124aa)
Sulfate adenylyltransferase subunit 1 n=1 Tax=Rhodovulum sp. PH10 RepID=J6J1G1_9RHOB
bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 27 items

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