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SCNpilot_cont_500_bf_scaffold_3090

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3090_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1181
DNA (1179bp) protein (393aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS04_PARL1 rbh
acyl-CoA dehydrogenase domain-containing protein rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABS62687.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_500_bf_scaffold_3090_2
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1299..2468
DNA (1170bp) protein (390aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS04_PARL1
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABS62687.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_500_bf_scaffold_3090_3
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

2471..3499
DNA (1029bp) protein (343aa)
MocA family oxido-reductase/dehydratase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B30686 rbh
aldo/keto reductase
Tax=RBG_13_Chloroflexi_56_8_curated
SCNpilot_cont_500_bf_scaffold_3090_4
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3602..4903)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P5T7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX58551.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
SCNpilot_cont_500_bf_scaffold_3090_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4906..5784)
DNA (879bp) protein (293aa)
taurine dioxygenase; K03119 taurine dioxygenase [EC:1.14.11.17]
Taurine dioxygenase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HW30_PARL1
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
SCNpilot_cont_500_bf_scaffold_3090_6
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5788..6933)
DNA (1146bp) protein (382aa)
glutathionylspermidine synthase n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037F8864 rbh
Glutathionylspermidine synthase {ECO:0000313|EMBL:KJV36568.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
putative glutathionylspermidine synthase rbh
SCNpilot_cont_500_bf_scaffold_3090_7
unknown

Not on your lists

comp(6936..7337)
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3090_8
Pseudomonas sp. 21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7351..7761)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Pseudomonas nitroreducens RepID=UPI0002E94639
Membrane protein {ECO:0000313|EMBL:KJK01932.1}; TaxID=1619948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 21.;"
hypothetical protein; K08989 putative membrane protein
SCNpilot_cont_500_bf_scaffold_3090_9
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7780..8532)
DNA (753bp) protein (251aa)
acetoacetyl-CoA reductase (EC:1.1.1.36)
Putative acetoacetyl-CoA reductase {ECO:0000313|EMBL:CCN25305.1}; EC=1.1.1.36 {ECO:0000313|EMBL:CCN25305.1};; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
Putative acetoacetyl-CoA reductase n=3 Tax=Bordetella bronchiseptica RepID=K4QPJ0_BORBO
SCNpilot_cont_500_bf_scaffold_3090_10
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8544..9356)
DNA (813bp) protein (271aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EKF43818.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EKF43818.1};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Nitratireductor indicus C115 RepID=K2N8K1_9RHIZ
SCNpilot_cont_500_bf_scaffold_3090_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9405..10937)
DNA (1533bp) protein (511aa)
anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27]
Anthranilate synthase component I n=1 Tax=alpha proteobacterium BAL199 RepID=A8TL54_9PROT rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3090_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10955..12868)
DNA (1914bp) protein (638aa)
parvulin-like peptidyl-prolyl isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
Parvulin-like peptidyl-prolyl isomerase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SAQ8_PHAFV rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3090_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12978..13733
DNA (756bp) protein (252aa)
tpiA; Triosephosphate isomerase 1; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1]
Triosephosphate isomerase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMJ2_9BRAD
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3090_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13804..14208
DNA (405bp) protein (135aa)
preprotein translocase subunit SecG n=1 Tax=Hoeflea sp. 108 RepID=UPI00037882D9
protein translocase subunit secG; K03075 preprotein translocase subunit SecG
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3090_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14308..15939
DNA (1632bp) protein (544aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] rbh
CTP synthase n=1 Tax=Azospirillum amazonense Y2 RepID=G1XYM9_9PROT rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3090_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16045..16797
DNA (753bp) protein (251aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3090_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16799..17713
DNA (915bp) protein (305aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3090_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17710..18090)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Exiguobacterium pavilionensis RW-2 RepID=U1N1K9_9BACL
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3090_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18224..19504
DNA (1281bp) protein (427aa)
eno; enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] rbh
Enolase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NZH2_AZOS1 rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3090_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19699..20532
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003774BBE rbh
Phytanoyl-CoA dioxygenase rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3090_21
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20612..21391
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G6L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46775.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
TRAP-type mannitol/chloroaromatic compound transport system, large permease component
SCNpilot_cont_500_bf_scaffold_3090_22
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21429..21827
DNA (399bp) protein (133aa)
Citrate transporter n=1 Tax=Enterococcus faecium EnGen0004 RepID=L2JH72_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ELA68911.1}; TaxID=1138888 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0015.;"
CitMHS family citrate-magnesium (Mg2+):proton (H+) citrate-calcium (Ca2+): proton (H+) symporter
SCNpilot_cont_500_bf_scaffold_3090_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21836..23989
DNA (2154bp) protein (718aa)
N-methylhydaintoinase A n=1 Tax=Clostridium sp. D5 RepID=F0YWS8_9CLOT rbh
N-methylhydaintoinase A {ECO:0000313|EMBL:EGB93416.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hydantoinase/oxoprolinase rbh
SCNpilot_cont_500_bf_scaffold_3090_24
unknown

Not on your lists

23986..24435
DNA (450bp) protein (150aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3090_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24426..24755)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PN08_9ACTO
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3090_26
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24756..25877)
DNA (1122bp) protein (374aa)
acyl-CoA dehydrogenase domain-containing protein; K00257 [EC:1.3.99.-]
acyl-CoA dehydrogenase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000368B919
CaiA protein {ECO:0000313|EMBL:BAQ49085.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
SCNpilot_cont_500_bf_scaffold_3090_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25979..26431
DNA (453bp) protein (151aa)
Transcriptional regulator, AraC family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I646_BORPD
AraC family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3090_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26463..26747
DNA (285bp) protein (95aa)
Transcriptional regulator, AraC family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I646_BORPD
AraC family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3090_29
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26891..27889
DNA (999bp) protein (333aa)
peptidyl-arginine deiminase; K10536 agmatine deiminase [EC:3.5.3.12] rbh
PREDICTED: agmatine deiminase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C11659 rbh
Agmatine deiminase {ECO:0000313|EMBL:KEA60305.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
SCNpilot_cont_500_bf_scaffold_3090_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27978..28763
DNA (786bp) protein (262aa)
Putative alanine/threonine--tRNA ligase n=1 Tax=Variovorax paradoxus B4 RepID=T1XBL9_VARPD
putative alanine/threonine--tRNA ligase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 40 in total

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