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SCNpilot_cont_500_bf_scaffold_3308

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3308_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63..1460
DNA (1398bp) protein (466aa)
gltA; citrate synthase I (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1]
Citrate synthase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GXS4_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3308_2
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1687..2094)
DNA (408bp) protein (136aa)
Lactoylglutathione lyase {ECO:0000256|RuleBase:RU361179}; EC=4.4.1.5 {ECO:0000256|RuleBase:RU361179};; Glyoxalase I {ECO:0000256|RuleBase:RU361179}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
gloA; lactoylglutathione lyase (EC:4.4.1.5); K01759 lactoylglutathione lyase [EC:4.4.1.5]
Lactoylglutathione lyase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NV21_AZOS1
SCNpilot_cont_500_bf_scaffold_3308_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2104..2580)
DNA (477bp) protein (159aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-); K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GXS9_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3308_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2598..4919)
DNA (2322bp) protein (774aa)
Outer membrane protein assembly factor BamA n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKY5_AZOBR rbh
outer membrane protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3308_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4961..6340)
DNA (1380bp) protein (460aa)
regulator of sigma E protease (EC:3.4.24.-); K11749 regulator of sigma E protease [EC:3.4.24.-] rbh
Regulator of sigma E protease n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ILL4_9SPHN rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3308_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6371..7573)
DNA (1203bp) protein (401aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2YCU0_9PROT rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3308_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7570..8265)
DNA (696bp) protein (232aa)
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41]
Phosphatidate cytidylyltransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HY14_PARL1
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3308_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8246..8986)
DNA (741bp) protein (247aa)
uppS; UDP pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31]
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035F4DE4
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3308_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8986..9540)
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9E2W5_9PROT
frr; ribosome recycling factor; K02838 ribosome recycling factor
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3308_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9543..10268)
DNA (726bp) protein (242aa)
pyrH; uridylate kinase (EC:2.7.4.22); K09903 uridylate kinase [EC:2.7.4.22] rbh
Uridylate kinase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NV33_AZOS1 rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3308_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10338..11264)
DNA (927bp) protein (309aa)
Elongation factor Ts n=1 Tax=Oceanibaculum indicum P24 RepID=K2JLK0_9PROT rbh
tsf; Elongation factor Ts (EF-Ts); K02357 elongation factor Ts rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3308_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11347..12138)
DNA (792bp) protein (264aa)
30S ribosomal protein S2 n=1 Tax=Elioraea tepidiphila RepID=UPI0003799434
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3308_13
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12309..13250)
DNA (942bp) protein (314aa)
Uncharacterized protein n=4 Tax=Burkholderia multivorans RepID=B9BTD3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AIO33642.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3308_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13247..16693)
DNA (3447bp) protein (1149aa)
dnaE1; DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] rbh
DNA polymerase III, alpha subunit n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZG81_AZOL4 rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3308_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16725..17408)
DNA (684bp) protein (228aa)
peptide ABC transporter ATPase; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
Peptide ABC transporter ATPase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TWD9_PHAFV
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3308_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17401..18678)
DNA (1278bp) protein (426aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family n=1 Tax=alpha proteobacterium BAL199 RepID=A8TUL9_9PROT
lolC; Lipoprotein ABC transporter; permease component LolC; K09808 lipoprotein-releasing system permease protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3308_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18671..19987)
DNA (1317bp) protein (439aa)
Lipoprotein-releasing system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NWI1_AZOS1
lolE; lipoprotein-releasing system permease; K09808 lipoprotein-releasing system permease protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3308_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20006..21331)
DNA (1326bp) protein (442aa)
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] rbh
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035D18B5
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3308_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21498..22790
DNA (1293bp) protein (431aa)
Xanthine dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JRP2_9PROT rbh
xanthine dehydrogenase; K06901 putative MFS transporter, AGZA family, xanthine/uracil permease rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 19 items

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