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SCNpilot_cont_500_bf_scaffold_3328

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3328_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..348)
DNA (348bp) protein (116aa)
ABC transporter related protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CU61_TRURR
ABC transporter-like protein; K01990 ABC-2 type transport system ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3328_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(358..1521)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E0F5A3
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3328_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1565..2179)
DNA (615bp) protein (205aa)
Glutathione S-transferase domain n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXS6_PARL1
glutathione S-transferase domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3328_4
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2287..3306)
DNA (1020bp) protein (340aa)
alcohol dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036F1A80 rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:ETR75226.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
alcohol dehydrogenase, zinc-binding domain rbh
SCNpilot_cont_500_bf_scaffold_3328_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3303..4187)
DNA (885bp) protein (295aa)
Alpha/beta hydrolase fold id=2636262 bin=GWF2_Methylomirabilis_70_14 species=alpha proteobacterium JLT2015 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
alpha/beta hydrolase fold protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3328_6
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4306..5367
DNA (1062bp) protein (354aa)
Blr0930 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89VW5_BRADU rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ETR78799.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3328_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5388..5879)
DNA (492bp) protein (164aa)
Transcriptional regulator, MerR family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7U6_STAND
MerR family transcriptional regulator {ECO:0000313|EMBL:CDN92311.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
MerR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_3328_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5933..6769
DNA (837bp) protein (279aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7U7_STAND rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDN92310.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_500_bf_scaffold_3328_9
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6801..8597)
DNA (1797bp) protein (599aa)
3-oxoacyl-[acyl-carrier-protein] synthase II n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HNE3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC53818.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
adenylate cyclase
SCNpilot_cont_500_bf_scaffold_3328_10
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8717..9517)
DNA (801bp) protein (267aa)
Transcriptional regulator, IclR family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IVY0_METNO
Transcriptional regulator IclR {ECO:0000313|EMBL:GAN75913.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
IclR family transcriptional regulator; K02624 IclR family transcriptional regulator, pca regulon regulatory protein
SCNpilot_cont_500_bf_scaffold_3328_11
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9658..10689
DNA (1032bp) protein (344aa)
Putative dioxygenase phtalate dioxygenase oxygenase subunit {ECO:0000313|EMBL:CCD93133.1}; EC=1.14.-.- {ECO:0000313|EMBL:CCD93133.1};; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
dioxygenase phtalate dioxygenase oxygenase subunit (EC:1.14.-.-); K00517 [EC:1.14.-.-]
Putative dioxygenase phtalate dioxygenase oxygenase subunit n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SG06_9BRAD
Displaying 11 items

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