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SCNpilot_cont_500_bf_scaffold_3700

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3700_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1134
DNA (1134bp) protein (378aa)
Peptide ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2GBR1_9BURK
dppA; peptide ABC transporter substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3700_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1140..2132
DNA (993bp) protein (331aa)
dppD3; ABC transporter ATPase (EC:3.6.3.23); K02031 peptide/nickel transport system ATP-binding protein
ABC transporter ATPase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S7D1_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3700_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2113..3108
DNA (996bp) protein (332aa)
Putative oligopeptide ABC transporter ATP-binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1L3_CALAS
putative oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3700_4
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3121..3873)
DNA (753bp) protein (251aa)
Transcription regulator protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V5P0_9RHIZ
Contig_23, whole genome shotgun sequence {ECO:0000313|EMBL:KIX13336.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus sp. SPR.;"
transcriptional regulator protein; K13652 AraC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_3700_5
unknown

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comp(3940..4863)
DNA (924bp) protein (308aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3700_6
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5009..5710)
DNA (702bp) protein (234aa)
ABC transporter ATP-binding protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F0T5_9BURK
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EHK68115.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_3700_7
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5703..6431)
DNA (729bp) protein (243aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z5H8_9BRAD rbh
branched-chain amino acid ABC transporter ATP-binding protein rbh
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCNpilot_cont_500_bf_scaffold_3700_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6553..7428
DNA (876bp) protein (292aa)
glutathione S-transferase protein (EC:2.5.1.18)
glutathione S-transferase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003720688
Glutathione S-transferase {ECO:0000313|EMBL:EJC63455.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
SCNpilot_cont_500_bf_scaffold_3700_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7586..8599)
DNA (1014bp) protein (338aa)
Amino acid ABC transporter permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I7E0_AZOC5
amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_500_bf_scaffold_3700_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8596..9468)
DNA (873bp) protein (291aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XBR5_9BURK
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_500_bf_scaffold_3700_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9499..10731)
DNA (1233bp) protein (411aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Acidovorax sp. CF316 RepID=J1EPV9_9BURK
extracellular ligand-binding receptor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_500_bf_scaffold_3700_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10784..11719)
DNA (936bp) protein (312aa)
Chitooligosaccharide deacetylase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNF5_9PROT rbh
polysaccharide deacetylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3700_13
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11721..12620)
DNA (900bp) protein (300aa)
Polysaccharide deacetylase family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNF6_9PROT rbh
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EDP65343.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
polysaccharide deacetylase family protein
SCNpilot_cont_500_bf_scaffold_3700_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12700..13065
DNA (366bp) protein (122aa)
xdhA1; putative xanthine dehydrogenase (EC:1.17.1.4)
Putative xanthine dehydrogenase, small subunit n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A4Z2_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 14 items

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