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SCNpilot_cont_500_bf_scaffold_3861

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3861_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..929
DNA (927bp) protein (309aa)
actP; copper-transporting P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-transporting P-type ATPase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EUA0_BRASB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3861_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1043..1390
DNA (348bp) protein (116aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3861_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1503..2411
DNA (909bp) protein (303aa)
Membrane protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2J0L1_9BURK
integral membrane protein, terc family
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3861_4
unknown

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2585..2842
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3861_5
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2949..3779)
DNA (831bp) protein (277aa)
methyltransferase type 12 n=1 Tax=Agromyces italicus RepID=UPI0003B45C3E
Uncharacterized protein {ECO:0000313|EMBL:EDP66315.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
methyltransferase type 11
SCNpilot_cont_500_bf_scaffold_3861_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3776..4531)
DNA (756bp) protein (252aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13EU9_RHOPS
SCNpilot_cont_500_bf_scaffold_3861_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4612..5004)
DNA (393bp) protein (131aa)
carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] id=14625236 bin=bin7_NC10_sister species=Advenella kashmirensis genus=Advenella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
carboxymuconolactone decarboxylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3861_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5109..7034
DNA (1926bp) protein (642aa)
Probable potassium transport system protein kup n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1BRH5_9NEIS
potassium uptake protein; K03549 KUP system potassium uptake protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3861_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7039..7392)
DNA (354bp) protein (118aa)
glyoxalase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D93FF
putative bleomycin resistance protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3861_10
Photobacterium sp. AK15, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7389..8588)
DNA (1200bp) protein (400aa)
Multidrug-efflux transporter n=1 Tax=Photobacterium sp. AK15 RepID=L8JH86_9GAMM
Multidrug-efflux transporter {ECO:0000313|EMBL:ELR66777.1}; TaxID=1056511 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium sp. AK15.;"
major facilitator transporter
SCNpilot_cont_500_bf_scaffold_3861_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8585..8830)
DNA (246bp) protein (82aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3861_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8857..9354)
DNA (498bp) protein (166aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3861_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9398..9640
DNA (243bp) protein (81aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3861_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9747..12023
DNA (2277bp) protein (759aa)
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein (Fragment) n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJF8_9PROT
TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; K02014 iron complex outermembrane recepter protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3861_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12017..12895
DNA (879bp) protein (293aa)
TonB family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPH4_PARL1
TonB family protein; K03832 periplasmic protein TonB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3861_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12907..13896
DNA (990bp) protein (330aa)
Hemin transport protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IY27_RHOCS rbh
hmuS; hemin transport protein; K07225 putative hemin transport protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 16 items

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