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SCNpilot_cont_500_bf_scaffold_6404

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6404_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1317
DNA (1317bp) protein (439aa)
Serine endopeptidase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5U7_AZOL4
Serine endopeptidase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_6404_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1519..2499)
DNA (981bp) protein (327aa)
Luciferase-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIF8_9BURK
luciferase-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_6404_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2520..3008)
DNA (489bp) protein (163aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TLJ3_TISMK
yccU; O-acetylhomoserine/O-acetylserine sulfhydrylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_6404_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3022..4182
DNA (1161bp) protein (387aa)
L-fuculose-phosphate aldolase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HMT1_9BRAD rbh
NADH:flavin oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_6404_5
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4187..5383)
DNA (1197bp) protein (399aa)
Drug resistance transporter, Bcr/CflA subfamily n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TLZ7_TISMK
ydgK; Bcr/CflA family multidrug resistance transporter
Drug resistance transporter, Bcr/CflA subfamily {ECO:0000313|EMBL:AFK53785.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_500_bf_scaffold_6404_6
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5380..5838)
DNA (459bp) protein (153aa)
Transcriptional regulator, MarR family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ISL3_BORPD
MarR family transcriptional regulator; K06075 MarR family transcriptional regulator, transcriptional regulator for hemolysin
Winged helix DNA-binding domain protein {ECO:0000313|EMBL:KCB35084.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
SCNpilot_cont_500_bf_scaffold_6404_7
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6027..6251
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DD42_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL13150.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_500_bf_scaffold_6404_8
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6289..6726
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DD42_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL13150.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_500_bf_scaffold_6404_9
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6758..7516
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2QCY6_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EMD24626.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
SCNpilot_cont_500_bf_scaffold_6404_10
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7506..8249)
DNA (744bp) protein (248aa)
branched-chain amino acid ABC transporter ATP-binding protein (EC:3.6.3.-); K01996 branched-chain amino acid transport system ATP-binding protein rbh
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EPE7_BRASB rbh
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:KGM35652.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_cont_500_bf_scaffold_6404_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8253..8996)
DNA (744bp) protein (248aa)
branched-chain amino acid ABC transporter ATP-binding protein (EC:3.6.3.-); K01995 branched-chain amino acid transport system ATP-binding protein
Putative branched-chain amino acid ABC transporter (ATP-binding protein) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S648_9BRAD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_500_bf_scaffold_6404_12
bacterium YEK0313, Bacteria

Not on your lists

comp(8993..9961)
DNA (969bp) protein (323aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YBK2_9BRAD rbh
Leucine/isoleucine/valine transporter permease subunit {ECO:0000313|EMBL:CEJ11855.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_6404_13
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9958..10473)
DNA (516bp) protein (172aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Rhizobium sp. AP16 RepID=J2DAM5_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:KGM35640.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
urea or short-chain amide ABC transporter; K01997 branched-chain amino acid transport system permease protein
Displaying 13 items

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