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SCNpilot_cont_500_bf_scaffold_3005_15

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 45 / 55 BSCG 44 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 7836..8312

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein HMPREF0185_00201 n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QSU5_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 130.0
  • Bit_score: 120
  • Evalue 1.70e-24
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 130.0
  • Bit_score: 120
  • Evalue 2.50e-24
Ku protein; K10979 DNA end-binding protein Ku similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 117.0
  • Bit_score: 118
  • Evalue 2.10e-24

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGGTGACGGTCAACGCCGGCACCCGCGAGGAGGTCGAGCGTGGCGACTTGGTGAAGGGCTTCCAGGTCGCGAAGAACGAGTACGTGCTGTTCACCAAGGAGGAGCTCGACTTGGTGGAGACCGAAAGCACCAAGATCCTCGATATCGAGAAATTCATGCTGCGCTCCAGCATCGACCGGCTTTACTTGGACACGCCCTATCATCCCGTGCCGTCGGGCAAGGCCGGTGTCGAGGCCTTGGCGGTCATCCGGGAGGCCATGCGCAAGCAGCAGATGGTGGCGATCGGCCGCCTGGTCCTGAGCCAGCGCGAGCGGCTTTGCACCATCGAGGTCGAAGAAGACGCGCTACAGATGACGACCTTGCGCACCGAGGCCGAGATGCGGCGTTCCTTGACTCAGGACCGCCGGCGGAAAGCCAAAACGGTCGCGCGGCCAGGCCAAGGGGATCGGTCACCGCGGCGCCGGGCGGGTCGCTAA
PROTEIN sequence
Length: 159
MVTVNAGTREEVERGDLVKGFQVAKNEYVLFTKEELDLVETESTKILDIEKFMLRSSIDRLYLDTPYHPVPSGKAGVEALAVIREAMRKQQMVAIGRLVLSQRERLCTIEVEEDALQMTTLRTEAEMRRSLTQDRRRKAKTVARPGQGDRSPRRRAGR*