ggKbase home page

SCNpilot_cont_500_bf_scaffold_3005

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3005_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152..394
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CZN5_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJC85505.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
SCNpilot_cont_500_bf_scaffold_3005_2
unknown

Not on your lists

416..676
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3005_3
unknown

Not on your lists

comp(580..789)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3005_4
unknown

Not on your lists

1326..1730
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3005_5
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1919..2161
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037F97E1
Uncharacterized protein {ECO:0000313|EMBL:EJZ18684.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
SCNpilot_cont_500_bf_scaffold_3005_6
unknown

Not on your lists

comp(2306..2587)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3005_7
unknown

Not on your lists

2794..2997
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3005_8
unknown

Not on your lists

3008..3364
DNA (357bp) protein (119aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3005_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3648..3971)
DNA (324bp) protein (108aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3005_10
unknown

Not on your lists

4052..4342
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3005_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4690..5145
DNA (456bp) protein (152aa)
Heat shock protein Hsp20 n=2 Tax=Sinorhizobium medicae RepID=A6UD15_SINMW
heat shock protein Hsp20; K04080 molecular chaperone IbpA
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3005_12
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5217..5783
DNA (567bp) protein (189aa)
Response regulator receiver protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q235_9RHIZ
Response regulator receiver protein {ECO:0000313|EMBL:CCM78132.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
SCNpilot_cont_500_bf_scaffold_3005_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6078..6494
DNA (417bp) protein (139aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3005_14
unknown

Not on your lists

6878..7171
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3005_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7836..8312
DNA (477bp) protein (159aa)
Probable DNA repair protein HMPREF0185_00201 n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QSU5_BREDI
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Ku protein; K10979 DNA end-binding protein Ku
SCNpilot_cont_500_bf_scaffold_3005_16
unknown

Not on your lists

8334..8594
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3005_17
unknown

Not on your lists

comp(8498..8707)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3005_18
unknown

Not on your lists

comp(9020..9310)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3005_19
unknown

Not on your lists

9714..9977
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3005_20
unknown

Not on your lists

comp(10015..10128)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3005_21
unknown

Not on your lists

10347..10589
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3005_22
unknown

Not on your lists

10611..11147
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3005_23
unknown

Not on your lists

comp(11445..11657)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3005_24
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11711..12172
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2E9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX30187.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3005_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12198..12785
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000287BCC0
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_3005_26
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13238..13738
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037140F1
Tryptophan-rich sensory protein {ECO:0000313|EMBL:CDX46922.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
tryptophan-rich sensory protein; K07185 tryptophan-rich sensory protein
SCNpilot_cont_500_bf_scaffold_3005_27
unknown

Not on your lists

comp(13980..14210)
DNA (231bp) protein (77aa)

This feature has no annotations

Displaying 27 items

View Taxonomy