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SCNpilot_cont_500_bf_scaffold_588

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_588_1
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1615)
DNA (1614bp) protein (538aa)
Resolvase domain protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z4V7_9NEIS rbh
Resolvase domain protein {ECO:0000313|EMBL:EEG08189.1}; Flags: Precursor;; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
resolvase domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_588_2
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1626..2117)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXQ7_9BURK
hypothetical protein
Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
SCNpilot_cont_500_bf_scaffold_588_3
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2354..3355)
DNA (1002bp) protein (334aa)
Integrase family protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z4V9_9NEIS rbh
site-specific recombinase XerD rbh
Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
SCNpilot_cont_500_bf_scaffold_588_4
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3348..4268)
DNA (921bp) protein (307aa)
D12 class N6 adenine-specific DNA methyltransferase; K06223 DNA adenine methylase [EC:2.1.1.72] rbh
Site-specific DNA methylase n=1 Tax=Pseudomonas fluorescens R124 RepID=K0X3Q6_PSEFL rbh
Site-specific DNA methylase {ECO:0000313|EMBL:EJZ58510.1}; TaxID=743713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens R124.;"
SCNpilot_cont_500_bf_scaffold_588_5
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4210..4437)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X0T7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EON13117.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_588_6
unknown

Not on your lists

comp(4529..4939)
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_588_7
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4939..7656)
DNA (2718bp) protein (906aa)
DNA segregation ATPase FtsK/SpoIIIE-related protein n=3 Tax=root RepID=M4UIW8_RALSL rbh
DNA segregation ATPase FtsK/SpoIIIE-related protein {ECO:0000313|EMBL:AGH85571.1}; TaxID=1262456 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum FQY_4.;"
DNA segregation ATPase FtsK/SpoIIIE-related protein rbh
SCNpilot_cont_500_bf_scaffold_588_8
unknown

Not on your lists

comp(7666..8001)
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_588_9
unknown

Not on your lists

comp(7998..8309)
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_588_10
unknown

Not on your lists

comp(8306..8782)
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_588_11

Not on your lists

comp(8824..9081)
DNA (258bp) protein (86aa)
UPI0003CFAC15 related cluster n=1 Tax=unknown RepID=UPI0003CFAC15
Uncharacterized protein {ECO:0000313|EMBL:KKM73004.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_588_12
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9078..9326)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B4F31B
Uncharacterized protein {ECO:0000313|EMBL:EXL01435.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_588_13
unknown

Not on your lists

9374..9586
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_588_14
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9611..9928)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIQ0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62502.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_cont_500_bf_scaffold_588_15
unknown

Not on your lists

comp(9925..10329)
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_588_16

Not on your lists

comp(10319..10615)
DNA (297bp) protein (99aa)
Gp27 n=2 Tax=unclassified phages RepID=E7EKZ1_9VIRU
Gp27 {ECO:0000313|EMBL:ADV36496.1}; TaxID=945084 species="Viruses; unclassified phages.;" source="Edwardsiella phage eiDWF.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_588_17
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10612..11289)
DNA (678bp) protein (226aa)
Integrase family protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z4X5_9NEIS
site-specific recombinase XerC
Tax=RBG_16_Betaproteobacteria_56_24_curated
SCNpilot_cont_500_bf_scaffold_588_18
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11359..11586)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Janthinobacterium lividum RepID=UPI000288FFB0
Putative uncharacterized domain protein {ECO:0000313|EMBL:CDG84141.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
SCNpilot_cont_500_bf_scaffold_588_19
unknown

Not on your lists

comp(11583..11768)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_588_20
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11768..12232)
DNA (465bp) protein (155aa)
Bacteriophage protein (Gp55-like) n=1 Tax=Acinetobacter sp. HA RepID=I4ZTH6_9GAMM
Tax=RBG_16_Betaproteobacteria_56_24_curated
SCNpilot_cont_500_bf_scaffold_588_21
Yersinia similis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12356..12574)
DNA (219bp) protein (73aa)
Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U1N6_9ENTR
DNA-binding protein {ECO:0000313|EMBL:AHK20724.1}; TaxID=367190 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia similis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_588_22
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12610..13020
DNA (411bp) protein (137aa)
XRE family transcriptional regulator n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2G0P1_9GAMM
Putative transcription factor, MBF1 like protein {ECO:0000313|EMBL:EUJ11285.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
SCNpilot_cont_500_bf_scaffold_588_23
unknown

Not on your lists

13061..13435
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_588_24
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13432..13659)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DMX2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49586.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_500_bf_scaffold_588_25
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13673..13951)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DM47_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU64119.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_cont_500_bf_scaffold_588_26
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13945..14547)
DNA (603bp) protein (201aa)
Putative tail fiber assembly-like protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z2Z0_9NEIS
Putative tail fiber assembly-like protein {ECO:0000313|EMBL:EEG08943.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_588_27
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14544..14846)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DS46_DESVM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL08585.1}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
SCNpilot_cont_500_bf_scaffold_588_28
Bdellovibrio sp. ArHS, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14855..15610)
DNA (756bp) protein (252aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD87380.1}; TaxID=1569284 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio sp. ArHS.;"
SCNpilot_cont_500_bf_scaffold_588_29
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15623..19396)
DNA (3774bp) protein (1258aa)
Phage-related protein tail component-like protein n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GXT9_METFK rbh
Phage-related protein tail component-like protein rbh
Phage-related protein tail component-like protein {ECO:0000313|EMBL:ABE50948.1}; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
SCNpilot_cont_500_bf_scaffold_588_30
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19386..19793)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00036685BA
Uncharacterized protein {ECO:0000313|EMBL:KIL99105.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
hypothetical protein
Displaying items 1-30 of 61 in total

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