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SCNpilot_cont_500_bf_scaffold_3129

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3129_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..736)
DNA (735bp) protein (245aa)
Putative cointegrase resolution protein n=2 Tax=Rhodanobacter RepID=I4WWN1_9GAMM rbh
Putative cointegrase resolution protein {ECO:0000313|EMBL:EIL90322.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Plasmid replication region DNA-binding N-term
SCNpilot_cont_500_bf_scaffold_3129_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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904..2067
DNA (1164bp) protein (388aa)
Phage integrase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWN0_9GAMM
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AGG88839.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3129_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2064..2372
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDK5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88840.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3129_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2484..2813
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NM93_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88841.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3129_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3392..5170
DNA (1779bp) protein (593aa)
Copper-resistance protein, CopA family n=1 Tax=Rhodanobacter denitrificans RepID=M4NFL4_9GAMM rbh
Copper-resistance protein, CopA family {ECO:0000313|EMBL:AGG88842.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
copper-resistance protein, CopA family rbh
SCNpilot_cont_500_bf_scaffold_3129_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5167..7476
DNA (2310bp) protein (770aa)
Uncharacterized protein involved in copper resistance n=1 Tax=Rhodanobacter denitrificans RepID=M4NGR0_9GAMM rbh
uncharacterized protein involved in copper resistance rbh
Uncharacterized protein involved in copper resistance {ECO:0000313|EMBL:AGG88843.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3129_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7479..7931
DNA (453bp) protein (151aa)
Putative metal-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDK8_9GAMM
putative metal-binding protein
Putative metal-binding protein {ECO:0000313|EMBL:AGG88845.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3129_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8026..10065
DNA (2040bp) protein (680aa)
Putative multicopper oxidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NM98_9GAMM rbh
putative multicopper oxidase rbh
Putative multicopper oxidase {ECO:0000313|EMBL:AGG88846.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3129_9
unknown

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comp(10213..10458)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3129_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10617..11891
DNA (1275bp) protein (425aa)
Putative outer membrane efflux protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNZ1_9GAMM rbh
Putative outer membrane efflux protein {ECO:0000313|EMBL:EIM01183.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane protein rbh
SCNpilot_cont_500_bf_scaffold_3129_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12005..13180
DNA (1176bp) protein (392aa)
Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family n=1 Tax=Rhodanobacter denitrificans RepID=I4WWM0_9GAMM rbh
RND family efflux transporter, MFP subunit rbh
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGG88850.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3129_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13177..16353
DNA (3177bp) protein (1059aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Rhodanobacter denitrificans RepID=M4NMA6_9GAMM rbh
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGG88851.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
heavy metal efflux pump, cobalt-zinc-cadmium rbh
SCNpilot_cont_500_bf_scaffold_3129_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16357..16707
DNA (351bp) protein (117aa)
Copper binding periplasmic protein CusF n=1 Tax=Rhodanobacter denitrificans RepID=I4WWL8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88852.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3129_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16747..17145)
DNA (399bp) protein (133aa)
MerR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WWL7_9GAMM
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGG88855.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3129_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17476..17730
DNA (255bp) protein (85aa)
Copper chaperone n=1 Tax=Rhodanobacter denitrificans RepID=M4NFM6_9GAMM
copper chaperone
Copper chaperone {ECO:0000313|EMBL:AGG88857.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_3129_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18080..19576)
DNA (1497bp) protein (499aa)
Iron permease FTR1 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP00_9GAMM
Iron permease FTR1 {ECO:0000313|EMBL:EIM01192.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
high-affinity Fe2+/Pb2+ permease
Displaying 16 items

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