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SCNpilot_cont_500_bf_scaffold_4101

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4101_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1395
DNA (1395bp) protein (465aa)
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BYI7_DELAS rbh
transcriptional regulator rbh
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:ABX34530.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_500_bf_scaffold_4101_2
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1392..1979)
DNA (588bp) protein (196aa)
Transcriptional regulator, TetR family n=3 Tax=Delftia RepID=A9BYI6_DELAS rbh
TetR family transcriptional regulator rbh
Regulatory protein TetR {ECO:0000313|EMBL:AEF91729.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_cont_500_bf_scaffold_4101_3
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2075..3271
DNA (1197bp) protein (399aa)
Major facilitator superfamily MFS_1 n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQR2_DELSC rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEF91730.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_cont_500_bf_scaffold_4101_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3440..5974
DNA (2535bp) protein (845aa)
Iron complex outermembrane recepter protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WAQ2_DELAC rbh
TonB-dependent siderophore receptor family protein {ECO:0000313|EMBL:KFJ10518.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
TonB-dependent siderophore receptor rbh
SCNpilot_cont_500_bf_scaffold_4101_5
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6571..8166
DNA (1596bp) protein (532aa)
TonB-dependent siderophore receptor n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BYH5_DELAS rbh
Iron complex outermembrane recepter protein {ECO:0000313|EMBL:EZP47994.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_500_bf_scaffold_4101_6
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8266..9408
DNA (1143bp) protein (381aa)
PepSY-associated TM helix domain protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQR5_DELSC rbh
PepSY-associated TM helix domain-containing protein rbh
Membrane protein {ECO:0000313|EMBL:KEH10771.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
SCNpilot_cont_500_bf_scaffold_4101_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9405..9602
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W5I8_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD34938.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4101_8
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9627..10451)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X4R5_DELAC rbh
Histidine kinase {ECO:0000313|EMBL:KEH09271.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
response regulator receiver and Hpt phospho transfer protein rbh
SCNpilot_cont_500_bf_scaffold_4101_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10448..11098)
DNA (651bp) protein (217aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W9P0_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD34940.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
response regulator receiver protein rbh
SCNpilot_cont_500_bf_scaffold_4101_10
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11213..11584
DNA (372bp) protein (124aa)
chemotaxis protein CheY n=1 Tax=Chryseobacterium taeanense RepID=UPI0002FCFEB5
Chemotaxis protein CheY {ECO:0000313|EMBL:KEH09270.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
response regulator receiver protein
SCNpilot_cont_500_bf_scaffold_4101_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11584..11754
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WQG9_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD34942.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_4101_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11770..13332
DNA (1563bp) protein (521aa)
Uncharacterized protein (Fragment) n=2 Tax=Delftia acidovorans RepID=S2W9F0_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD34943.1}; Flags: Fragment;; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
multi-sensor signal transduction histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_4101_13
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13332..14285
DNA (954bp) protein (318aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WD89_DELAC
multi-sensor signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_4101_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14358..14921
DNA (564bp) protein (188aa)
RNA polymerase sigma-70 factor, ECF subfamily n=2 Tax=Delftia acidovorans RepID=S2WAX0_DELAC rbh
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EPD36896.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
SCNpilot_cont_500_bf_scaffold_4101_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14918..15994
DNA (1077bp) protein (359aa)
Transmembrane sensor n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WVL5_DELAC rbh
Transmembrane sensor {ECO:0000313|EMBL:EPD36897.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
anti-FecI sigma factor FecR; K07165 transmembrane sensor rbh
SCNpilot_cont_500_bf_scaffold_4101_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16083..18464
DNA (2382bp) protein (794aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D87709 rbh
Iron complex outermembrane recepter protein {ECO:0000313|EMBL:EPD36891.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_500_bf_scaffold_4101_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18649..19836
DNA (1188bp) protein (396aa)
muconate and chloromuconate cycloisomerase (EC:5.5.1.1); K01856 muconate cycloisomerase [EC:5.5.1.1] rbh
Muconate cycloisomerase n=2 Tax=Delftia acidovorans RepID=S2WFD2_DELAC rbh
Muconate cycloisomerase {ECO:0000313|EMBL:EPD36899.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_4101_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19865..20143
DNA (279bp) protein (93aa)
muconolactone delta-isomerase (EC:5.3.3.4); K03464 muconolactone D-isomerase [EC:5.3.3.4]
Muconolactone Delta-isomerase {ECO:0000256|PIRNR:PIRNR001486}; Short=MIase {ECO:0000256|PIRNR:PIRNR001486};; EC=5.3.3.4 {ECO:0000256|PIRNR:PIRNR001486};; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Muconolactone Delta-isomerase n=4 Tax=Delftia RepID=A9BYG6_DELAS
SCNpilot_cont_500_bf_scaffold_4101_19
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20186..21178
DNA (993bp) protein (331aa)
Uncharacterized protein n=3 Tax=cellular organisms RepID=A9BYG5_DELAS rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEF91746.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_cont_500_bf_scaffold_4101_20
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21226..22140
DNA (915bp) protein (305aa)
intradiol ring-cleavage dioxygenase; K03381 catechol 1,2-dioxygenase [EC:1.13.11.1] rbh
3''''-RNA processing protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002ED5234 rbh
mRNA 3'-end processing factor {ECO:0000313|EMBL:KEH09265.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
SCNpilot_cont_500_bf_scaffold_4101_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22855..23163
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WAX9_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD36903.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4101_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23180..24136)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WFC9_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD36885.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_4101_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24209..25093
DNA (885bp) protein (295aa)
LysR family transcriptional regulator n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D6D313 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD36905.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_4101_24
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25090..25332)
DNA (243bp) protein (81aa)
NAD-dependent formate dehydrogenase subunit delta; K00126 formate dehydrogenase, delta subunit [EC:1.2.1.2]
NAD-dependent formate dehydrogenase subunit delta n=3 Tax=Delftia RepID=F6ARL2_DELSC
NAD-dependent formate dehydrogenase subunit delta {ECO:0000313|EMBL:AEF91750.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_cont_500_bf_scaffold_4101_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25332..28256)
DNA (2925bp) protein (975aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] rbh
Formate dehydrogenase, alpha subunit n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WVK3_DELAC rbh
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:EPD36882.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
SCNpilot_cont_500_bf_scaffold_4101_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28281..30479)
DNA (2199bp) protein (733aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WAY5_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD36908.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
respiratory-chain NADH dehydrogenase domain 51 kDa subunit rbh
SCNpilot_cont_500_bf_scaffold_4101_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30779..31222
DNA (444bp) protein (148aa)
Transcriptional regulator, MarR family n=4 Tax=Delftia RepID=A9BV37_DELAS
MarR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EPD36909.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_4101_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31316..31489)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XAF3_DELAC
major facilitator transporter; K08369 MFS transporter, putative metabolite:H+ symporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABX34496.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Displaying 28 items

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