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SCNpilot_cont_500_bf_scaffold_4431

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4431_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..2023)
DNA (2022bp) protein (674aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] rbh
DNA helicase II/ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=S2Y3L4_DELAC rbh
SCNpilot_cont_500_bf_scaffold_4431_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2300..3277
DNA (978bp) protein (326aa)
GMP reductase {ECO:0000256|HAMAP-Rule:MF_01511, ECO:0000256|SAAS:SAAS00082324}; EC=1.7.1.7 {ECO:0000256|HAMAP-Rule:MF_01511, ECO:0000256|SAAS:SAAS00043008};; Guanosine 5'-monophosphate oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01511}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
GMP reductase (EC:1.7.1.7); K00364 GMP reductase [EC:1.7.1.7] rbh
GMP reductase n=2 Tax=Delftia acidovorans RepID=S2WWS0_DELAC rbh
SCNpilot_cont_500_bf_scaffold_4431_trna_1
unknown

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3456..3528
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_4431_3
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3568..4566)
DNA (999bp) protein (333aa)
Extracellular solute-binding protein, family 7 n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AZ77_DELSC rbh
TRAP dicarboxylate transporter-DctP subunit {ECO:0000313|EMBL:EZP48398.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
family 7 extracellular solute-binding protein rbh
SCNpilot_cont_500_bf_scaffold_4431_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4834..6066
DNA (1233bp) protein (411aa)
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein n=2 Tax=Delftia acidovorans RepID=S2X3V9_DELAC rbh
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein {ECO:0000313|EMBL:EPD43864.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Bcr/CflA subfamily drug resistance transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein rbh
SCNpilot_cont_500_bf_scaffold_4431_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6095..7564)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=S2X8A9_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD46415.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
diguanylate cyclase rbh
SCNpilot_cont_500_bf_scaffold_4431_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7715..8410)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XF91_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43862.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
DEAD/DEAH box helicase
SCNpilot_cont_500_bf_scaffold_4431_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8388..9647)
DNA (1260bp) protein (420aa)
DEAD/DEAH box helicase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E6E0F5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43862.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
DEAD/DEAH box helicase domain-containing protein
SCNpilot_cont_500_bf_scaffold_4431_8
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9979..10584)
DNA (606bp) protein (202aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
oligoribonuclease; K13288 oligoribonuclease [EC:3.1.-.-] rbh
Oligoribonuclease n=2 Tax=Delftia acidovorans RepID=S2WWR6_DELAC rbh
SCNpilot_cont_500_bf_scaffold_4431_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10615..11916
DNA (1302bp) protein (434aa)
Ste24 endopeptidase (EC:3.4.24.84); K06013 STE24 endopeptidase [EC:3.4.24.84] rbh
STE24 endopeptidase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X119_DELAC rbh
STE24 endopeptidase {ECO:0000313|EMBL:EPD43860.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_4431_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11933..12265
DNA (333bp) protein (111aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
pterin-4-alpha-carbinolamine dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
Putative pterin-4-alpha-carbinolamine dehydratase n=2 Tax=Delftia acidovorans RepID=S2X3V3_DELAC
SCNpilot_cont_500_bf_scaffold_4431_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12284..13252
DNA (969bp) protein (323aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
ribosome biogenesis GTPase RsgA; K06949 ribosome biogenesis GTPase [EC:3.6.1.-] rbh
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WVP9_DELAC rbh
SCNpilot_cont_500_bf_scaffold_4431_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13344..14087)
DNA (744bp) protein (248aa)
cobalamin biosynthesis protein CbiB; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10] rbh
Cobalamin biosynthesis protein CobD n=2 Tax=Delftia acidovorans RepID=S2XF86_DELAC rbh
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Displaying 13 items

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