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SCNpilot_cont_500_bf_scaffold_5034

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5034_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

248..1156
DNA (909bp) protein (303aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35) rbh
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WH35_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD34381.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_5034_2
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1448..2956
DNA (1509bp) protein (503aa)
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391};; Gamma-ECS {ECO:0000256|HAMAP-Rule:MF_00578}; Gamma-glutamylcysteine synthetase {ECO:0000256|HAMAP-Rule:MF_00578}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
glutamate--cysteine ligase (EC:6.3.2.2); K01919 glutamate--cysteine ligase [EC:6.3.2.2] rbh
Glutamate--cysteine ligase n=2 Tax=Delftia acidovorans RepID=S2WNY1_DELAC rbh
SCNpilot_cont_500_bf_scaffold_5034_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2964..3176)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W3S1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD34383.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5034_4
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3179..3421)
DNA (243bp) protein (81aa)
Uncharacterized protein n=3 Tax=Delftia RepID=S2WXE2_DELAC
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF91168.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_cont_500_bf_scaffold_5034_5
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3590..4543
DNA (954bp) protein (318aa)
Ribosome biogenesis GTPase A n=2 Tax=Bacteria RepID=S2WDW0_DELAC rbh
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
ribosome biogenesis GTP-binding protein YlqF; K14540 ribosome biogenesis GTPase A rbh
SCNpilot_cont_500_bf_scaffold_5034_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4670..6958
DNA (2289bp) protein (763aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WH31_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD37485.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase rbh
SCNpilot_cont_500_bf_scaffold_5034_7
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7001..8146)
DNA (1146bp) protein (382aa)
amidohydrolase (EC:3.5.1.32); K01451 hippurate hydrolase [EC:3.5.1.32] rbh
Hippurate hydrolase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XCB0_DELAC rbh
Amidohydrolase {ECO:0000313|EMBL:KEH07674.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
SCNpilot_cont_500_bf_scaffold_5034_8
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8380..9372
DNA (993bp) protein (331aa)
phosphoesterase n=1 Tax=Chryseobacterium taeanense RepID=UPI00036D7B77 rbh
Phosphoesterase {ECO:0000313|EMBL:KEH12131.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
phosphoesterase DHHA1 rbh
SCNpilot_cont_500_bf_scaffold_5034_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9312..10214)
DNA (903bp) protein (301aa)
pseudouridine synthase; K06175 tRNA pseudouridine65 synthase [EC:5.4.99.26] rbh
Pseudouridine synthase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X327_DELAC rbh
tRNA pseudouridine65 synthase {ECO:0000313|EMBL:EPD34389.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_5034_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10353..11408
DNA (1056bp) protein (352aa)
diaminopimelate dehydrogenase (EC:1.4.1.16); K03340 diaminopimelate dehydrogenase [EC:1.4.1.16] rbh
Diaminopimelate dehydrogenase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WDV6_DELAC rbh
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:EPD37481.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
SCNpilot_cont_500_bf_scaffold_5034_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11405..12778)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W5A2_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD34391.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
major facilitator superfamily protein rbh
SCNpilot_cont_500_bf_scaffold_5034_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12869..13216
DNA (348bp) protein (116aa)
Uncharacterized protein n=3 Tax=Delftia RepID=A9BZ19_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFJ10749.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCNpilot_cont_500_bf_scaffold_5034_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13572..15023
DNA (1452bp) protein (484aa)
phospholipase D/transphosphatidylase; K06131 cardiolipin synthase [EC:2.7.8.-] rbh
Cardiolipin synthase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WCJ4_DELAC rbh
Cardiolipin synthase {ECO:0000313|EMBL:EPD37478.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
SCNpilot_cont_500_bf_scaffold_5034_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15088..15981)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WXD1_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD37477.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5034_15
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16215..16724
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W871_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:KEH12126.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5034_16
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16749..17630)
DNA (882bp) protein (294aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W5A6_DELAC rbh
Peptidase M23 {ECO:0000313|EMBL:KEH07670.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
peptidase M23 rbh
SCNpilot_cont_500_bf_scaffold_5034_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17744..19786)
DNA (2043bp) protein (681aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XC99_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD37474.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5034_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19948..20265)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WCJ0_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37473.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5034_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20322..21038)
DNA (717bp) protein (239aa)
type 12 methyltransferase; K15256 tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] rbh
tRNA (Cmo5U34)-methyltransferase n=2 Tax=Delftia acidovorans RepID=S2W7Z6_DELAC rbh
tRNA (Cmo5U34)-methyltransferase {ECO:0000313|EMBL:EPD34300.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_5034_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21166..21600)
DNA (435bp) protein (145aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18); K01886 glutaminyl-tRNA synthetase [EC:6.1.1.18]
PREDICTED: probable glutamine--tRNA ligase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C163C2
SCNpilot_cont_500_bf_scaffold_5034_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21576..22208)
DNA (633bp) protein (211aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18); K01886 glutaminyl-tRNA synthetase [EC:6.1.1.18]
Glutamine--tRNA ligase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X2S5_DELAC
Displaying 21 items

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