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SCNpilot_cont_500_bf_scaffold_7595

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7595_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..159
DNA (159bp) protein (53aa)
GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16]
GTP cyclohydrolase I n=4 Tax=cellular organisms RepID=S2X3I9_DELAC
GTP cyclohydrolase I {ECO:0000313|EMBL:EPD43749.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_7595_2
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

265..1146
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XM50_DELAC rbh
Membrane protein {ECO:0000313|EMBL:KEH14179.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_7595_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1218..2015
DNA (798bp) protein (266aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WWH9_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43751.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_7595_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2058..2702
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2XEZ5_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43752.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
lysine exporter protein LysE/YggA rbh
SCNpilot_cont_500_bf_scaffold_7595_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2773..3825
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WVF9_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43753.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
AraC family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_7595_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3968..4915
DNA (948bp) protein (316aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2X3J1_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43754.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_7595_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4902..6353)
DNA (1452bp) protein (484aa)
Amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] rbh
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X0U9_DELAC rbh
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A {ECO:0000313|EMBL:EPD43755.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_7595_8
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6454..7902)
DNA (1449bp) protein (483aa)
Peptide/nickel transport system substrate-binding protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X2P3_DELAC rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEH14185.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_7595_9
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8039..8881)
DNA (843bp) protein (281aa)
Peptide/nickel transport system ATP-binding protein n=2 Tax=Delftia acidovorans RepID=S2XEZ8_DELAC rbh
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEH10694.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
ABC transporter-like protein; K02032 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_7595_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8878..9933)
DNA (1056bp) protein (352aa)
peptide ABC transporter ATPase (EC:3.6.3.24); K02031 peptide/nickel transport system ATP-binding protein rbh
ABC transporter n=1 Tax=Chryseobacterium taeanense RepID=UPI0003040AA3 rbh
Peptide/nickel transport system ATP-binding protein {ECO:0000313|EMBL:EPD43758.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_7595_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9948..10865)
DNA (918bp) protein (306aa)
Peptide/nickel transport system permease n=3 Tax=Bacteria RepID=S2X3J7_DELAC rbh
Peptide/nickel transport system permease {ECO:0000313|EMBL:EPD43759.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
ABC transporter permease; K02034 peptide/nickel transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_7595_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10862..11365)
DNA (504bp) protein (168aa)
Peptide/nickel transport system permease n=2 Tax=Delftia acidovorans RepID=S2X0V2_DELAC
Peptide/nickel transport system permease {ECO:0000313|EMBL:EPD43760.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
ABC transporter permease; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_7595_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12017..12280
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=S2WWI6_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43761.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
4Fe-4S ferredoxin
SCNpilot_cont_500_bf_scaffold_7595_14
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12285..12908)
DNA (624bp) protein (208aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] rbh
Peptidyl-tRNA hydrolase n=2 Tax=Delftia acidovorans RepID=S2XF01_DELAC rbh
SCNpilot_cont_500_bf_scaffold_7595_15
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13033..13662)
DNA (630bp) protein (210aa)
50S ribosomal protein L25 n=2 Tax=Delftia acidovorans RepID=S2WVG9_DELAC rbh
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 rbh
SCNpilot_cont_500_bf_scaffold_7595_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13835..14770)
DNA (936bp) protein (312aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia a
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] rbh
Ribose-phosphate pyrophosphokinase n=2 Tax=Delftia acidovorans RepID=S2X3K2_DELAC rbh
SCNpilot_cont_500_bf_scaffold_7595_trna_1
unknown

Not on your lists

comp(14842..14915)
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_7595_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14945..15808)
DNA (864bp) protein (288aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148); K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] rbh
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002EB6381 rbh
SCNpilot_cont_500_bf_scaffold_7595_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15879..16391)
DNA (513bp) protein (171aa)
Outer membrane lipoprotein LolB n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WWI8_DELAC rbh
Outer-membrane lipoprotein LolB {ECO:0000256|SAAS:SAAS00002103}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
outer membrane lipoprotein LolB; K02494 outer membrane lipoprotein LolB rbh
SCNpilot_cont_500_bf_scaffold_7595_19
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16436..16858)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2Y3A0_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KEH14195.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
Displaying 20 items

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