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SCNpilot_cont_500_bf_scaffold_2254

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2254_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..540)
DNA (540bp) protein (180aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Avi_7169 family alkylhydroperoxidase domain-containing protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WVE5_DELAC rbh
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2254_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(537..1229)
DNA (693bp) protein (231aa)
Avi_7170 family CMD domain-containing protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WAN0_DELAC rbh
Avi_7170 family CMD domain-containing protein {ECO:0000313|EMBL:EPD36793.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2254_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1226..2338)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XX89_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD44159.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
Luciferase-like, subgroup rbh
SCNpilot_cont_500_bf_scaffold_2254_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2319..4010)
DNA (1692bp) protein (564aa)
nickel-transporting ATPase (EC:3.6.3.30 3.6.3.24); K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein rbh
Peptide/nickel transport system ATP-binding protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W2G8_DELAC rbh
Peptide/nickel transport system ATP-binding protein {ECO:0000313|EMBL:EPD33968.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_2254_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4007..4963)
DNA (957bp) protein (319aa)
Binding-protein-dependent transport systems inner membrane component n=3 Tax=Delftia RepID=A9BS86_DELAS rbh
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein rbh
Peptide/nickel transport system permease {ECO:0000313|EMBL:EPD44157.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
SCNpilot_cont_500_bf_scaffold_2254_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4960..5907)
DNA (948bp) protein (316aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BS87_DELAS rbh
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABX33701.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_500_bf_scaffold_2254_7
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5936..7609)
DNA (1674bp) protein (558aa)
ABC transporter substrate binding protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W6V7_DELAC rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEH14755.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2254_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7861..8412
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X1R3_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD33964.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
OsmC family protein rbh
SCNpilot_cont_500_bf_scaffold_2254_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8438..9277
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WWL3_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD44153.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2254_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9454..10650
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XG32_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD44152.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
molecular chaperone, HSP70 class; K04046 hypothetical chaperone protein rbh
SCNpilot_cont_500_bf_scaffold_2254_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10818..11678)
DNA (861bp) protein (287aa)
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] rbh
16S rRNA (-2'-O)-methyltransferase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W452_DELAC rbh
16S rRNA (-2'-O)-methyltransferase {ECO:0000313|EMBL:EPD33961.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_2254_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11759..12175
DNA (417bp) protein (139aa)
UPF0102 protein DelCs14_5459 n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B176_DELSC
hypothetical protein; K07460 putative endonuclease
UPF0102 protein DR66_433 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCNpilot_cont_500_bf_scaffold_2254_13
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12249..12857
DNA (609bp) protein (203aa)
phosphoheptose isomerase; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] rbh
D-sedoheptulose 7-phosphate isomerase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XX76_DELAC rbh
Phosphoheptose isomerase {ECO:0000313|EMBL:KEH14759.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
SCNpilot_cont_500_bf_scaffold_2254_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12854..13585
DNA (732bp) protein (244aa)
transporter n=1 Tax=Chryseobacterium taeanense RepID=UPI0002DCD4A1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD33958.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
transport-associated protein rbh
SCNpilot_cont_500_bf_scaffold_2254_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13785..14618)
DNA (834bp) protein (278aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31); K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] rbh
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WMP8_DELAC rbh
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:EPD33957.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_2254_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14778..15914)
DNA (1137bp) protein (379aa)
Twitching motility protein PilU n=2 Tax=Delftia acidovorans RepID=S2W450_DELAC rbh
Twitching motility protein PilU {ECO:0000313|EMBL:EPD44146.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
twitching motility protein; K02670 twitching motility protein PilU rbh
SCNpilot_cont_500_bf_scaffold_2254_17
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16044..16676)
DNA (633bp) protein (211aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Chryseobacterium taeanense RepID=UPI00030321BC rbh
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KEH14763.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
putative Crp/Fnr family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_2254_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16708..17751)
DNA (1044bp) protein (348aa)
Twitching mobility protein n=2 Tax=Delftia acidovorans RepID=S2X1Q1_DELAC rbh
Twitching mobility protein {ECO:0000313|EMBL:EPD33954.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
twitching motility protein; K02669 twitching motility protein PilT rbh
SCNpilot_cont_500_bf_scaffold_2254_19
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18126..18452
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00030E6BD4
Uncharacterized protein {ECO:0000313|EMBL:KEH11165.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein; K06997
SCNpilot_cont_500_bf_scaffold_2254_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18491..19774)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XG21_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD44142.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
extracellular ligand-binding receptor rbh
SCNpilot_cont_500_bf_scaffold_2254_21
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19801..20523)
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WQJ7_DELAC rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EZP57767.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
TetR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_2254_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20683..21951
DNA (1269bp) protein (423aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] rbh
Long-chain acyl-CoA synthetase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X1V4_DELAC rbh
Long-chain acyl-CoA synthetase {ECO:0000313|EMBL:EPD44140.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
Displaying 22 items

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