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SCNpilot_cont_500_bf_scaffold_2358

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2358_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151..816)
DNA (666bp) protein (222aa)
ABC-type transporter, integral membrane subunit n=3 Tax=Delftia RepID=F6AVM5_DELSC rbh
ABC transporter permease; K02072 D-methionine transport system permease protein rbh
D-methionine transport system permease {ECO:0000313|EMBL:EPD43546.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_2358_2
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(794..1942)
DNA (1149bp) protein (383aa)
D-methionine transport system ATP-binding protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X053_DELAC rbh
Methionine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEH13877.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
ABC transporter-like protein; K02071 D-methionine transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2358_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1956..2768)
DNA (813bp) protein (271aa)
Lipoprotein n=3 Tax=Delftia acidovorans RepID=A9BXG7_DELAS rbh
NLPA lipoprotein; K02073 D-methionine transport system substrate-binding protein rbh
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_2358_4
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2781..3818)
DNA (1038bp) protein (346aa)
2OG-Fe(II) oxygenase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXG8_DELAS rbh
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:KEH10283.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
2OG-Fe(II) oxygenase; K06892 rbh
SCNpilot_cont_500_bf_scaffold_2358_5
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3854..5269)
DNA (1416bp) protein (472aa)
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:KEH13874.1}; EC=2.5.1.49 {ECO:0000313|EMBL:KEH13874.1};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.49) rbh
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XEA3_DELAC rbh
SCNpilot_cont_500_bf_scaffold_2358_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5488..6555
DNA (1068bp) protein (356aa)
ABC-type nitrate/sulfonate/bicarbonate transport system periplasmic protein n=2 Tax=Delftia RepID=F6AUT5_DELSC rbh
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein; K02051 NitT/TauT family transport system substrate-binding protein rbh
NitT/TauT family transport system substrate-binding protein {ECO:0000313|EMBL:EPD43541.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_2358_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6552..7607
DNA (1056bp) protein (352aa)
sulfonate ABC transporter permease n=1 Tax=Chryseobacterium taeanense RepID=UPI0002EB6587 rbh
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KFJ14417.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
ABC transporter permease; K02050 NitT/TauT family transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_2358_8
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7601..8437
DNA (837bp) protein (279aa)
ABC transporter related n=2 Tax=Delftia acidovorans RepID=A9BXH2_DELAS rbh
ABC transporter {ECO:0000313|EMBL:KEH13872.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2358_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8607..9575
DNA (969bp) protein (323aa)
cytochrome C n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E4A919 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43538.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
cytochrome c, mono-and diheme variant-like protein rbh
SCNpilot_cont_500_bf_scaffold_2358_10
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9621..9902)
DNA (282bp) protein (94aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AUS4_DELSC
RelE/StbE family addiction module toxin
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:AEF88012.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_cont_500_bf_scaffold_2358_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9899..10180)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WVU3_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43536.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2358_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10433..10906
DNA (474bp) protein (158aa)
2Fe-2S iron-sulfur cluster-binding domain-containing protein; K07302 isoquinoline 1-oxidoreductase, alpha subunit [EC:1.3.99.16] rbh
Isoquinoline 1-oxidoreductase, alpha subunit n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2Y2P1_DELAC rbh
Isoquinoline 1-oxidoreductase, alpha subunit {ECO:0000313|EMBL:EPD46089.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
SCNpilot_cont_500_bf_scaffold_2358_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10921..13086
DNA (2166bp) protein (722aa)
isoquinoline 1-oxidoreductase (EC:1.3.99.16); K07303 isoquinoline 1-oxidoreductase, beta subunit [EC:1.3.99.16] rbh
Isoquinoline 1-oxidoreductase, beta subunit n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XVJ1_DELAC rbh
Molybdopterin-binding domain of aldehyde dehydrogenase family protein {ECO:0000313|EMBL:KFJ14359.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCNpilot_cont_500_bf_scaffold_2358_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13149..14120)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WUP8_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43533.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_2358_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14205..15095)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XE93_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43532.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2358_16
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15092..16087)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WVT6_DELAC rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EZP53964.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_2358_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16084..17064)
DNA (981bp) protein (327aa)
NADPH:quinone reductase (EC:1.6.5.5); K00344 NADPH2:quinone reductase [EC:1.6.5.5] rbh
NADPH:quinone reductase n=3 Tax=Delftia RepID=F6AUR7_DELSC rbh
NADPH2:quinone reductase {ECO:0000313|EMBL:EPD43530.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_2358_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17196..18314)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XVI6_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43529.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
porin rbh
SCNpilot_cont_500_bf_scaffold_2358_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18396..19394)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXI1_DELAS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX38257.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_500_bf_scaffold_2358_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19441..20526)
DNA (1086bp) protein (362aa)
cobalamin biosynthesis protein P47K n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D28AD5 rbh
cobalamin synthesis protein P47K rbh
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:ABX38258.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_500_bf_scaffold_2358_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20523..20912)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WVS9_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43526.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2358_22
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20921..22711)
DNA (1791bp) protein (597aa)
5-oxoprolinase (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] rbh
N-methylhydantoinase B n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X025_DELAC rbh
5-oxoprolinase {ECO:0000313|EMBL:KEH10274.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
SCNpilot_cont_500_bf_scaffold_2358_23
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22708..24804)
DNA (2097bp) protein (699aa)
5-oxoprolinase (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] rbh
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:AEF87999.1}; EC=3.5.2.9 {ECO:0000313|EMBL:AEF87999.1};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AUR1_DELSC rbh
SCNpilot_cont_500_bf_scaffold_2358_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24819..25679)
DNA (861bp) protein (287aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (EC:4.1.1.68) rbh
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase n=2 Tax=Delftia acidovorans RepID=A9BXI6_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43523.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_2358_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25835..26722
DNA (888bp) protein (296aa)
Transcriptional regulator, LysR family n=3 Tax=Delftia RepID=F6AUQ9_DELSC rbh
LysR family transcriptional regulator rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43522.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Displaying 25 items

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