ggKbase home page

SCNpilot_cont_500_bf_scaffold_2452

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2452_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..149)
DNA (147bp) protein (49aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
Aldehyde Dehydrogenase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B1G9_DELSC
Aldehyde dehydrogenase family protein {ECO:0000313|EMBL:KFJ13391.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCNpilot_cont_500_bf_scaffold_2452_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(186..1457)
DNA (1272bp) protein (424aa)
glucarate dehydratase (EC:4.2.1.40); K01706 glucarate dehydratase [EC:4.2.1.40] rbh
Glucarate dehydratase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WI30_DELAC rbh
Glucarate dehydratase {ECO:0000313|EMBL:EPD37820.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_2452_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1454..2503)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XDB8_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD37819.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_2452_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2624..3583)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WDJ6_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD37818.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2452_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3642..4553)
DNA (912bp) protein (304aa)
Probable 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; EC=4.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00694};; 5-keto-4-deoxy-glucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
5-dehydro-4-deoxyglucarate dehydratase (EC:4.2.1.41); K01707 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41] rbh
Probable 5-dehydro-4-deoxyglucarate dehydratase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XVD4_DELAC rbh
SCNpilot_cont_500_bf_scaffold_2452_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4599..5576)
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Delftia RepID=S2WUJ6_DELAC rbh
hypothetical protein rbh
Tripartite tricarboxylate transporter receptor family protein {ECO:0000313|EMBL:KFJ13494.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCNpilot_cont_500_bf_scaffold_2452_7
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5752..6540)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XE25_DELAC rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KEH07384.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
GntR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_2452_8
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6628..7944
DNA (1317bp) protein (439aa)
mandelate racemase/muconate lactonizing protein; K01706 glucarate dehydratase [EC:4.2.1.40] rbh
Glucarate dehydratase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WVL4_DELAC rbh
Glucarate dehydratase {ECO:0000313|EMBL:KEH12407.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
SCNpilot_cont_500_bf_scaffold_2452_9
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7992..8990
DNA (999bp) protein (333aa)
MFS transporter n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E7CBC2 rbh
MFS transporter {ECO:0000313|EMBL:KEH07386.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_2452_10
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9179..10744
DNA (1566bp) protein (522aa)
Galactarate dehydrogenase {ECO:0000313|EMBL:KEH07387.1}; EC=4.2.1.42 {ECO:0000313|EMBL:KEH07387.1};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
galactarate dehydratase (EC:4.2.1.42); K01708 galactarate dehydratase [EC:4.2.1.42] rbh
Galactarate dehydratase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XVC9_DELAC rbh
SCNpilot_cont_500_bf_scaffold_2452_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10806..11801
DNA (996bp) protein (332aa)
Membrane protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WEU9_DELAC rbh
Membrane protein {ECO:0000313|EMBL:EPD37811.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
ribonuclease BN; K07058 membrane protein rbh
SCNpilot_cont_500_bf_scaffold_2452_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11925..12863
DNA (939bp) protein (313aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WI20_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD37810.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_2452_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13084..13947
DNA (864bp) protein (288aa)
Branched-chain amino acid transport system permease n=3 Tax=Bacteria RepID=S2WVK9_DELAC rbh
Branched-chain amino acid transport system permease {ECO:0000313|EMBL:EPD37809.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_2452_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13948..14922
DNA (975bp) protein (325aa)
ABC transporter permease n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E27206 rbh
Branched-chain amino acid transport system permease {ECO:0000313|EMBL:EPD37808.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_2452_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14909..15673
DNA (765bp) protein (255aa)
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XVC3_DELAC rbh
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:EPD43469.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2452_16
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15660..16367
DNA (708bp) protein (236aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K01996 branched-chain amino acid transport system ATP-binding protein rbh
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AEF87307.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AEF87307.1};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
Monosaccharide-transporting ATPase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B1I4_DELSC rbh
SCNpilot_cont_500_bf_scaffold_2452_17
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16545..17459
DNA (915bp) protein (305aa)
Extracellular ligand-binding receptor n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQV5_DELAS rbh
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein rbh
Branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:EZP51975.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
Displaying 17 items

View Taxonomy