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SCNpilot_cont_500_bf_scaffold_10420

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_10420_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..102
DNA (102bp) protein (34aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W3Z3_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD34443.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
xylose isomerase domain-containing protein
SCNpilot_cont_500_bf_scaffold_10420_2
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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177..1202
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WZT7_DELAC rbh
Aldo/keto reductase {ECO:0000313|EMBL:KEH12317.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
aldo/keto reductase rbh
SCNpilot_cont_500_bf_scaffold_10420_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1219..1674)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2Y0M7_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD45314.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_10420_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1674..2444)
DNA (771bp) protein (257aa)
Transcriptional regulator, IclR family n=2 Tax=Delftia acidovorans RepID=A9C0J6_DELAS rbh
IclR family transcriptional regulator; K02624 IclR family transcriptional regulator, pca regulon regulatory protein rbh
Bacterial transcriptional regulator family protein {ECO:0000313|EMBL:KFJ08554.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCNpilot_cont_500_bf_scaffold_10420_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2631..4025
DNA (1395bp) protein (465aa)
3-(2-hydroxyphenyl) propionic acid transporter n=1 Tax=Chryseobacterium taeanense RepID=UPI0002EF9267 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD34439.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
major facilitator transporter rbh
SCNpilot_cont_500_bf_scaffold_10420_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4061..4834
DNA (774bp) protein (258aa)
shikimate dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] rbh
Shikimate 5-dehydrogenase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W3Y8_DELAC rbh
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:EPD34438.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_10420_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4861..6021
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WP29_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD34437.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
porin rbh
SCNpilot_cont_500_bf_scaffold_10420_8
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6033..7094
DNA (1062bp) protein (354aa)
oxidoreductase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D3CC2D rbh
oxidoreductase domain-containing protein rbh
Oxidoreductase {ECO:0000313|EMBL:KEH12311.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
SCNpilot_cont_500_bf_scaffold_10420_9
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7121..7558
DNA (438bp) protein (146aa)
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10]
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
3-dehydroquinate dehydratase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AY67_DELSC
SCNpilot_cont_500_bf_scaffold_10420_10
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8247..8864
DNA (618bp) protein (206aa)
MFS transporter n=1 Tax=Chryseobacterium taeanense RepID=UPI00030D2A13
MFS transporter {ECO:0000313|EMBL:KEH12310.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
major facilitator transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
SCNpilot_cont_500_bf_scaffold_10420_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8871..9527)
DNA (657bp) protein (219aa)
Transcriptional regulator, GntR family n=4 Tax=Delftia RepID=A9C0I9_DELAS rbh
GntR family transcriptional regulator rbh
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:KFJ08795.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCNpilot_cont_500_bf_scaffold_10420_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9743..10594
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WP25_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD34432.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
6-phosphogluconate dehydrogenase NAD-binding protein rbh
SCNpilot_cont_500_bf_scaffold_10420_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10642..11628
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W5D9_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD34431.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_10420_14
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11669..12181
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X538_DELAC rbh
dimethylmenaquinone methyltransferase rbh
Uncharacterized protein {ECO:0000313|EMBL:KEH07060.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
Displaying 14 items

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