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SCNpilot_cont_500_bf_scaffold_8677

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8677_1
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..460
DNA (459bp) protein (153aa)
UTP-GlnB uridylyltransferase, GlnD (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59]
PII uridylyl-transferase n=1 Tax=Chryseobacterium taeanense RepID=UPI000318CE16
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
SCNpilot_cont_500_bf_scaffold_8677_2
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(542..1795)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W684_DELAC rbh
Uracil permease {ECO:0000313|EMBL:KEH10151.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
xanthine permease rbh
SCNpilot_cont_500_bf_scaffold_8677_3
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2238..2777)
DNA (540bp) protein (180aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] rbh
Peptide deformylase n=3 Tax=Bacteria RepID=S2X165_DELAC rbh
SCNpilot_cont_500_bf_scaffold_8677_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2965..3384
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X4G3_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD46918.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein; K09790 hypothetical protein
SCNpilot_cont_500_bf_scaffold_8677_trna_1
unknown

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3471..3543
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_8677_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3591..3917)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WKA8_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD39731.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8677_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4155..4940
DNA (786bp) protein (262aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6); K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6] rbh
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X5H1_DELAC rbh
SCNpilot_cont_500_bf_scaffold_8677_7
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4937..5686
DNA (750bp) protein (250aa)
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:0000256|HAMAP-Rule:MF_00689};; EC=2.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194290};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
arginine-tRNA-protein transferase domain-containing protein; K00685 arginine-tRNA-protein transferase [EC:2.3.2.8] rbh
Putative arginyl-tRNA--protein transferase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X9R4_DELAC rbh
SCNpilot_cont_500_bf_scaffold_8677_8
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5814..6638
DNA (825bp) protein (275aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2XJE0_DELAC rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:KEH13176.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
IclR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_8677_9
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6728..7789)
DNA (1062bp) protein (354aa)
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; K07262 D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] rbh
D-alanyl-D-alanine endopeptidase (Penicillin-binding protein 7) n=2 Tax=Delftia acidovorans RepID=S2WNN0_DELAC rbh
Peptidase S11 {ECO:0000313|EMBL:KEH13177.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
Displaying 10 items

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