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SCNpilot_cont_500_bf_scaffold_6008

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6008_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..102)
DNA (102bp) protein (34aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovora
phosphomethylpyrimidine synthase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E1EB2A
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC
SCNpilot_cont_500_bf_scaffold_6008_2
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(557..1219)
DNA (663bp) protein (221aa)
Nitroreductase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTI2_DELAS rbh
nitroreductase rbh
Nitroreductase {ECO:0000313|EMBL:EZP52868.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
SCNpilot_cont_500_bf_scaffold_6008_3
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1282..2106)
DNA (825bp) protein (275aa)
Serine acetyltransferase {ECO:0000313|EMBL:EZP52867.1}; EC=2.3.1.30 {ECO:0000313|EMBL:EZP52867.1};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
serine O-acetyltransferase (EC:2.3.1.30); K00640 serine O-acetyltransferase [EC:2.3.1.30] rbh
serine O-acetyltransferase n=1 Tax=Chryseobacterium taeanense RepID=UPI00031F42F8 rbh
SCNpilot_cont_500_bf_scaffold_6008_4
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2142..2951)
DNA (810bp) protein (270aa)
tRNA/rRNA methyltransferase SpoU; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-] rbh
tRNA/rRNA methyltransferase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WYA2_DELAC rbh
tRNA/rRNA methyltransferase {ECO:0000313|EMBL:EZP52866.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
SCNpilot_cont_500_bf_scaffold_6008_5
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3168..4088
DNA (921bp) protein (307aa)
inositol-phosphate phosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] rbh
Myo-inositol-1(Or 4)-monophosphatase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WDF2_DELAC rbh
Myo-inositol-1(Or 4)-monophosphatase {ECO:0000313|EMBL:EZP52865.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
SCNpilot_cont_500_bf_scaffold_6008_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4526..6523)
DNA (1998bp) protein (666aa)
Elongation factor G n=2 Tax=Bacteria RepID=S2XD84_DELAC rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
translation elongation factor G; K02355 elongation factor G rbh
SCNpilot_cont_500_bf_scaffold_6008_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6898..7248
DNA (351bp) protein (117aa)
Regulatory protein ArsR n=3 Tax=Delftia RepID=F6B270_DELSC
regulatory protein ArsR
Putative transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABX34944.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_500_bf_scaffold_6008_8
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

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comp(7286..7696)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TG90_RICCO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEF25125.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
SCNpilot_cont_500_bf_scaffold_6008_9
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7978..8304
DNA (327bp) protein (109aa)
prevent-host-death protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003618768
prevent-host-death family protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_cont_500_bf_scaffold_6008_10
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8297..8671
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLB2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ09130.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6008_11
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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8697..10193
DNA (1497bp) protein (499aa)
Type-1 restriction enzyme R protein {ECO:0000313|EMBL:EXI87466.1}; EC=3.1.21.3 {ECO:0000313|EMBL:EXI87466.1};; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
Type III restriction endonuclease subunit R n=1 Tax=Pseudomonas aeruginosa DHS01 RepID=V4X544_PSEAI rbh
hsdR-4; type I restriction enzyme subunit R rbh
Displaying 11 items

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